FMO11519.5prime Sequence
377 bp (377 high quality bases) assembled on 2012-05-14
> FMO11519.5prime
CAGTCGACATGGCCGATGATGAAGATAAACCAAAGAAGCACACGCTGGAC
AGCCTGTTCTTGGTGTATTCCAACTTCCAGGTCATACCCACCGACATCGA
GAACGAGTACTTTGACAGCATACTCCTCTCGCAGTTGGACGCCTGGCTAG
AGCAGGCCAAGCTCATGCCCAATCCCATAACTCGAACTCAGACCGGTTTA
ATATACATGCGATACAAGAAATGGCGTTTGGAGTACGAAGACTTTCTCGA
GGTCCTAAATAACTTGGCATCCGATAACAATCTGGCTATAGATGAAATGA
AGCAAATAATGATCGATGCTGGCGTCCCGAATGGTGCTGATGTAGTTATA
GTCGTCAAGGCAAGCTTTCTAGACCAT
FMO11519.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14164-RB | 1331 | CG14164-RB | 846..1196 | 9..359 | 1755 | 100 | Plus |
| CG6709-RB | 1331 | CG6709-RB | 846..1196 | 9..359 | 1755 | 100 | Plus |
| CG6709-RA | 596 | CG6709-RA | 111..461 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9893323..9893464 | 359..218 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 9893517..9893658 | 218..77 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 9893707..9893780 | 82..9 | 370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:41:32 has no hits.
FMO11519.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:04 Download gff for
FMO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6709-RB | 842..1202 | 1..367 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:26 Download gff for
FMO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14164-RB | 842..1202 | 1..367 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:18 Download gff for
FMO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6709-RA | 107..467 | 1..367 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:18 Download gff for
FMO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9893317..9893464 | 218..367 | 97 | <- | Minus |
| 3L | 9893518..9893654 | 81..217 | 100 | <- | Minus |
| 3L | 9893709..9893784 | 1..80 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:26 Download gff for
FMO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9886417..9886564 | 218..367 | 97 | <- | Minus |
| arm_3L | 9886618..9886754 | 81..217 | 100 | <- | Minus |
| arm_3L | 9886809..9886884 | 1..80 | 95 | | Minus |
