FMO11526.5prime Sequence
209 bp (-71 high quality bases) assembled on 2012-05-14
> FMO11526.5prime
CACTCGACATGTTGTTACAATCGATATTTCTGAAAATATTGGCCGTTTTT
TTGGTCTGCTGGCTGGGACACGTCACAGCCCAGTCATCTGCCCATTATAT
AGAGCTTGAAATTGGTTCAAGGGGTGAAGGTCCACCGGAAAAGACGGAAT
TTCCCTGGGGCAATGATGACCAGGATCTTGAAGCAACATTTGCAAGCTTT
CTAGACCAT
FMO11526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43071-RC | 514 | CG43071-RC | 26..208 | 9..191 | 870 | 98.4 | Plus |
CG43071-RB | 316 | CG43071-RB | 26..208 | 9..191 | 870 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18864927..18865056 | 191..62 | 635 | 99.2 | Minus |
2R | 25286936 | 2R | 18865140..18865193 | 62..9 | 240 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:41:59 has no hits.
FMO11526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:09 Download gff for
FMO11526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RA | 2..165 | 31..195 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:40 Download gff for
FMO11526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RB | 23..217 | 6..202 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:28 Download gff for
FMO11526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43071-RB | 23..217 | 6..202 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:28 Download gff for
FMO11526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18864924..18865055 | 63..192 | 96 | <- | Minus |
2R | 18865140..18865196 | 6..62 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:40 Download gff for
FMO11526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14752429..14752560 | 63..192 | 96 | <- | Minus |
arm_2R | 14752645..14752701 | 6..62 | 94 | | Minus |