Clone FMO11528 Report

Search the DGRC for FMO11528

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:28
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34180-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11528.5prime Sequence

254 bp (254 high quality bases) assembled on 2012-05-14

> FMO11528.5prime
CAGTCGACATGCTTTACAAATCTCTGCTGTTTTGCTTGGCGGCGGTTTTG
TTCATTCCGGCGCATTCCGATGCCAAGGAATATCAGTTCATCCCCGCTCG
ATGCGAGGAGCAGCCTGGAGTGGGTCAACAGATTGGCGGTCCCTTAAGCA
TATGCAGCTTTCCACCAGACTATGCGAAACCGGATTCAGAGGACATACAG
GCCGTGATTAAACACATTAAGAGCTTGAAATTGAATGCAAGCTTTCTAGA
CCAT

FMO11528.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34180-RB 376 CG34180-RB 35..262 9..236 1140 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6060668..6060824 80..236 785 100 Plus
2L 23513712 2L 6060544..6060618 9..83 360 98.7 Plus
Blast to na_te.dros performed 2014-11-28 02:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 10324..10370 53..7 118 72.3 Minus

FMO11528.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:10 Download gff for FMO11528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34180-RB 28..262 1..236 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:45 Download gff for FMO11528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34180-RB 28..262 1..236 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:32 Download gff for FMO11528.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34180-RB 28..262 1..236 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:32 Download gff for FMO11528.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6060537..6060614 1..79 95 -> Plus
2L 6060668..6060824 80..236 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:45 Download gff for FMO11528.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6060537..6060614 1..79 95 -> Plus
arm_2L 6060668..6060824 80..236 100   Plus