Clone FMO11530 Report

Search the DGRC for FMO11530

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14563-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11530.5prime Sequence

407 bp (407 high quality bases) assembled on 2012-05-14

> FMO11530.5prime
CAGTCGACATGGCCAGAAAAATCATGTCAGTGAAACAGTCGAGCCGCTCT
CCATGTTGTTGGTTCGGTTTGCTCCTGGTCGCCATTTTCCTGCAGCCATC
CGCGAGCCAATACTACGGTTATCCCTATTACGGCGGCGCTAATGCGGGAG
CGGGATCGGGATACGGGAACATATACGGCAGCGGCATGTACGGATACCCC
TACAGCTACGGCGGATATCCGTACTACTCGTATCCCGGCTACAACCCGTA
CTCGATGTACGGTGGATACGGGCAGTACGGATACCCCTATGGAGGATATC
CCTACGGCGGCAATGGCATGAACGTGGCCTACGCCAGCAGCAGTGGAGGA
TTCGCAACAGCCAGTGCGGGTGGAAGCGGATACTACGGCGCAAGCTTTCT
AGACCAT

FMO11530.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14563-RA 499 CG14563-RA 15..397 7..389 1915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21842058..21842372 321..7 1575 100 Minus
3L 28110227 3L 21841910..21841977 389..322 340 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:42:15 has no hits.

FMO11530.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:12 Download gff for FMO11530.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14563-RA 7..405 1..395 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:49 Download gff for FMO11530.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14563-RA 7..405 1..395 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:36 Download gff for FMO11530.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14563-RA 7..405 1..395 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:36 Download gff for FMO11530.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21841902..21841977 322..395 96 <- Minus
3L 21842058..21842376 1..321 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:49 Download gff for FMO11530.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21835002..21835077 322..395 96 <- Minus
arm_3L 21835158..21835476 1..321 98   Minus