FMO11533.5prime Sequence
344 bp (344 high quality bases) assembled on 2012-05-14
> FMO11533.5prime
CAGTCGACATGCACCTGACGCTGATCAATTTGTTCAAGAAGACTGTGCCC
GGCCACATATTCCGGGGCAAGCGGCGCCTGGTGAAACCGGTCAGTCAGCG
AGCAATGGACACCCTGACCCACGAGTACGAGCGCCAGGAGCAGGTAATGT
TACTCCTCCGACACCCGTATCTCACCATGGAGCAGTCATTCGGTCATGCC
AAGGAGCTGCAGAAGCGCGAGAAGCTCGTTGCCAGATGGACGGACGAGCA
GACACTGCGCAAGATGAAGCCACACGTTACCATCGAGGAGCGGCTGAACC
AGCTGAAGATCAAGGAGGCCTGGGACGCAAGCTTTCTAGACCAT
FMO11533.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14817-RB | 920 | CG14817-RB | 132..449 | 9..326 | 1590 | 100 | Plus |
| CG14817-RA | 508 | CG14817-RA | 132..449 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1876968..1877139 | 180..9 | 860 | 100 | Minus |
| X | 23542271 | X | 1876765..1876912 | 326..179 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:42:28 has no hits.
FMO11533.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:14 Download gff for
FMO11533.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14817-RA | 53..381 | 1..332 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:56 Download gff for
FMO11533.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14817-RA | 125..453 | 1..332 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:40 Download gff for
FMO11533.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14817-RA | 125..453 | 1..332 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:40 Download gff for
FMO11533.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1876761..1876911 | 180..332 | 98 | <- | Minus |
| X | 1876969..1877146 | 1..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:56 Download gff for
FMO11533.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1771002..1771179 | 1..179 | 97 | | Minus |
| arm_X | 1770794..1770944 | 180..332 | 98 | <- | Minus |
