FMO11534.5prime Sequence
602 bp (602 high quality bases) assembled on 2012-05-14
> FMO11534.5prime
CAGTCGACATGTTGCCAATAATCTGGTGGTTCGGCATTATAGTATGCAGT
CTAGATACCGCAGATACCGCTAAGCTGATTCCAAACATGGGCTACTATAT
AGAAATGAAGCAAATGGATTGCGTGGGCAATCCCAACTATTTCGCGAACC
TGTACTGCAGGATTATACCACCCAAAAACCGGACCATGGAGGCTTCTGTG
AATATTATGCAACAGTTGAGTGTTTTCAGTGGTTCACTTCGAGTGTCCAT
ACCCAATGCCAAGAAGGTCATAACCCAGATATTCGACATCACCTTCGATG
TGTGCAAGGTGCTGCGGGAACGCAAGCGGAAGATTCTCATCGATCTTTTG
GTCAACACTTTGGCCAAGAACAGCAATGCAAAGGCTTGGAGATGTCCTTT
TCCAAAGGGTAAATTTGAGTCGAGAAACATTTCGGTTACCGATCTGCCGC
CAATGCTAACCGAATCGGAGTTTTTTGTGAACTTGGACTTCTTTATACCC
AAGGTGGCCATTGCCATGAATGTCACCTTACATGGGCATCTCTTTGAGAT
TGCAAAGGAAAGGAACAGGCGGAAGAAATATTTGGCAAGCTTTCTAGACC
AT
FMO11534.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30050-RB | 670 | CG30050-RB | 11..586 | 9..584 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12409101..12409425 | 84..408 | 1625 | 100 | Plus |
| 2R | 25286936 | 2R | 12409473..12409651 | 406..584 | 895 | 100 | Plus |
| 2R | 25286936 | 2R | 12408964..12409038 | 9..83 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:41:44 has no hits.
FMO11534.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:06 Download gff for
FMO11534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 4..595 | 1..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:32 Download gff for
FMO11534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 4..595 | 1..596 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:21 Download gff for
FMO11534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30050-RB | 4..595 | 1..596 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:21 Download gff for
FMO11534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12408957..12409038 | 1..83 | 95 | -> | Plus |
| 2R | 12409101..12409424 | 84..407 | 100 | -> | Plus |
| 2R | 12409475..12409660 | 408..596 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:32 Download gff for
FMO11534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8296462..8296543 | 1..83 | 95 | -> | Plus |
| arm_2R | 8296606..8296929 | 84..407 | 100 | -> | Plus |
| arm_2R | 8296980..8297165 | 408..596 | 97 | | Plus |
