FMO11545.5prime Sequence
566 bp (566 high quality bases) assembled on 2012-05-14
> FMO11545.5prime
CAGTCGACATGTCGAATATTTCAAGTGTGGCACCACCTCCTCCCCCACCA
CCCATGATAGTCACTCCTAGCACACCTGCTACCACAAAGGAACGTCCAGT
TGGGGACAATATAACCACCGATGAGTGCACTTGGGCATGTGAGTATCCTG
AGGTGCAGAAAGGATGCTATTTAAGTCGCGTCTGCCAATATACACCACCG
AAACACTGTCAATACTACTCCGTAAACAGCATAGTGCAGGTGGGACCTAC
TTGTGGCTTAGTGGCCCTCAGCATGTTGCTTGGTGGCAGTCCCACGGCAG
ATGATCTCCTCAAGGATGCAATCGACCAGGAGTATACCCTTAATGGTGAA
CTATTTAGTGCTCAGTATTTGTTTGAACTGACCCGGAAGCATATGCCAGG
ACCTGCTGCGTGTCAGTTGCATGTAGGTCCTTTGGACTGCAAAAAAGTCA
AGGAACTTTTAAAGGCCGGAGGCTGCCTACTAGTGCCGTATCCTTTTTCA
AAAATATTGCCATTTAAACCCGGGTTGAGTTTGGTATTCCCCTGCATTGC
AAGCTTTCTAGACCAT
FMO11545.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33108-RB | 725 | CG33108-RB | 77..617 | 8..548 | 2705 | 100 | Plus |
CG33108-RA | 931 | CG33108-RA | 77..556 | 8..487 | 2400 | 100 | Plus |
LSm3-RA | 643 | CG31184-RA | 1..79 | 470..548 | 395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23996030..23996340 | 238..548 | 1555 | 100 | Plus |
3R | 32079331 | 3R | 23995735..23995969 | 8..242 | 1175 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:43:12 has no hits.
FMO11545.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:22 Download gff for
FMO11545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33108-RB | 66..612 | 8..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:17 Download gff for
FMO11545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33108-RB | 77..623 | 8..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:00 Download gff for
FMO11545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33108-RB | 77..623 | 8..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:00 Download gff for
FMO11545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23995735..23995966 | 8..239 | 100 | -> | Plus |
3R | 23996032..23996346 | 240..554 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:17 Download gff for
FMO11545.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19821457..19821688 | 8..239 | 100 | -> | Plus |
arm_3R | 19821754..19822068 | 240..554 | 99 | | Plus |