Clone FMO11547 Report

Search the DGRC for FMO11547

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:47
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32801-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11547.5prime Sequence

500 bp (500 high quality bases) assembled on 2012-05-14

> FMO11547.5prime
CAGTCGACATGAAACCGGGACTCGAAACCACCGACGAGGTCGAGGAGAAT
GGCGACGCACTGGATCATCGCGAGGGGGATCCCCGACCGCTGCCCTACGA
CTTCGAAAAGGAGCTGATCCATAGATCTAACCGGCACATCCGACTTTACG
AAACCTTTGTTCCAGTGAGCCAAGTTCATCCGCTAACACGGAAGTTCTAC
GCCCAGTATGAGCAACGCCAGCCGACGGATACCTTGAGGTACCTACGGCA
CACTTGGCCTGAGAAGCATGTGGAGCGTCAGAGGCAGCTCGGAAAAGCTG
TTCCGCTCCTGGAGTCGCAGGTGTACGGCTGGTTGCCGCTCAAAAGTGGA
GAGCGAGCCGCCGATCTGAACTTTCTGCATGCCAAGAAGGTGCGCTGCGG
CATGACTGTTCACGGGGAGCGCTTGGTGGCGGAGAGGATTACGGCGCGTC
CTCCGTTTAACGGACTCAGATTCCTGCTTCACGCAAGCTTTCTAGACCAT

FMO11547.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32801-RA 937 CG32801-RA 390..864 8..482 2375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1902155..1902464 482..173 1550 100 Minus
X 23542271 X 1902622..1902788 174..8 835 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:42:35 has no hits.

FMO11547.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:15 Download gff for FMO11547.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32801-RA 1..477 9..486 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:59 Download gff for FMO11547.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32801-RA 384..867 1..486 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:36:45 Download gff for FMO11547.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32801-RA 384..867 1..486 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:36:45 Download gff for FMO11547.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1902152..1902462 175..486 99 <- Minus
X 1902622..1902794 1..174 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:59 Download gff for FMO11547.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1796185..1796495 175..486 99 <- Minus
arm_X 1796655..1796827 1..174 98   Minus