Clone FMO11551 Report

Search the DGRC for FMO11551

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:51
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42713-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11551.5prime Sequence

302 bp (302 high quality bases) assembled on 2012-05-14

> FMO11551.5prime
CAGTCGACATGAAATTCCTTCTGATCCTGGCCAGTGTGGTCCTCTATGTG
GCCCTCAGCTCTGCTCAGTCTTGCCCAGGACGTCCATCCCATCAGAACTG
CTTACACGGGAAGGACGAAGGAGTTGAACGCGCAAGGCATTGTAATAGGG
ATCCCAATCCACAGATGTGGTACTACAACCAACGTGAAAATAGGTGCATC
AAGATGAGGTACCTCGGCTGTAAGGGCAACCGCAATCGTTATTGCACATT
GAACGAGTGTCAAAGGAAATGCGTTCGACGATCAGCAAGCTTTCTAGACC
AT

FMO11551.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42713-RA 674 CG42713-RA 66..343 7..284 1390 100 Plus
CG42713-RB 424 CG42713-RB 66..343 7..284 1390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8891653..8891849 88..284 985 100 Plus
2L 23513712 2L 8891505..8891585 7..87 405 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:43:38 has no hits.

FMO11551.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:26 Download gff for FMO11551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42713-RA 12..294 1..284 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:30 Download gff for FMO11551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42713-RB 61..343 1..284 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:12 Download gff for FMO11551.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42713-RB 61..343 1..284 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:12 Download gff for FMO11551.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8891500..8891585 1..87 97 -> Plus
2L 8891653..8891849 88..284 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:30 Download gff for FMO11551.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8891500..8891585 1..87 97 -> Plus
arm_2L 8891653..8891849 88..284 100   Plus