FMO11557.5prime Sequence
581 bp (581 high quality bases) assembled on 2012-05-14
> FMO11557.5prime
CAGTCGACATGTTCCGCTTCATTGCTATCTGTGCCCTGGCCACCATTGTC
GCCGCTGCACCGGGATTCATTGAGGAGCACCCCGTGGCCGTCGCCCCAGT
TGTGGCCAAAGTAGGTGCCGTGGTGCACAGTGCCCCACTGGCCACCTCCC
ACCAGAGCTTCACCCAGTACCACAACCAGGCGGTGCTCACTCCCGTGGTG
AAGCATGTGGTGCCAGCTGTTCCCGTGATTAAGACTGTGGCTCCAGTGGT
TCCTGTGGTCAAGCATGTGGCTCCCATCGTGCCCGTGGTCAAGCAAGTGG
CTCCCATCGTGCCCGTGGTCAAGCACGTGGCTCCAGTGGTTCCCGTCATC
AAGACTGTGCCCGTGGTGCACCACCAGACCTACGTCGCACCCGCTGTCCA
CCATGTGGCCGCCGTGCCCGTGGTGAAGGCTCTACCCCATGCCGTCTCCC
ACCAGAGCCACACCCAGGTGCACCACCAGAAGACCATCATCACCCCGGTG
GTTGCTCCTGTGGTCAAGACTGTCGCCGTCGCCGCTGCTCCAGTGGCCCA
TGTCTACCATCATGCAAGCTTTCTAGACCAT
FMO11557.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13040-RB | 1419 | CG13040-RB | 797..1353 | 7..563 | 2785 | 100 | Plus |
CG13040-RA | 659 | CG13040-RA | 37..593 | 7..563 | 2785 | 100 | Plus |
CG13040-RB | 1419 | CG13040-RB | 981..1113 | 221..353 | 275 | 80.5 | Plus |
CG13040-RB | 1419 | CG13040-RB | 1011..1143 | 191..323 | 275 | 80.5 | Plus |
CG13040-RA | 659 | CG13040-RA | 251..383 | 191..323 | 275 | 80.5 | Plus |
CG13040-RA | 659 | CG13040-RA | 221..353 | 221..353 | 275 | 80.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16325149..16325691 | 563..21 | 2715 | 100 | Minus |
3L | 28110227 | 3L | 16325359..16325491 | 323..191 | 275 | 80.5 | Minus |
3L | 28110227 | 3L | 16325389..16325521 | 353..221 | 275 | 80.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:44:02 has no hits.
FMO11557.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:30 Download gff for
FMO11557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13040-RA | 30..596 | 1..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:43 Download gff for
FMO11557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13040-RA | 30..593 | 1..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:23 Download gff for
FMO11557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13040-RA | 30..593 | 1..563 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:23 Download gff for
FMO11557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16325149..16325691 | 21..563 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:43 Download gff for
FMO11557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16318249..16318791 | 21..563 | 100 | <- | Minus |