Clone FMO11558 Report

Search the DGRC for FMO11558

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptEig71Ek-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11558.5prime Sequence

317 bp (317 high quality bases) assembled on 2012-05-14

> FMO11558.5prime
CAGTCGACATGTGGAAAATATTCTTGCTGTTGGTTCTTTGTATCCTGCAA
TTGTGCCACATTGATGCTCAATGGAGTCGAGTGTACTGTGAGAATATCTA
TAACGATTGTCAACGATTTACATCCAGAATAGGACGATTTGATGAGACTA
TAGATTCCTTTAATCGTCATTGTCGTCGGGAGCGCAGAGGAAGGTGGAAC
AGTGTGTCTCGATGTGAAATGGAAAAAGCCACCTGTCTTCTGATTTTTCG
ACGCTGTGATGATATGTCCTGTAACAACATTGCAGATGTCTTGGAATTGG
CAAGCTTTCTAGACCAT

FMO11558.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ek-RA 445 CG7325-RA 25..315 9..299 1455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15661357..15661564 33..240 1040 100 Plus
3L 28110227 3L 15661621..15661679 241..299 295 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:43:16 has no hits.

FMO11558.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:22 Download gff for FMO11558.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ek-RA 25..318 9..303 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:20 Download gff for FMO11558.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ek-RA 25..318 9..303 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:02 Download gff for FMO11558.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ek-RA 25..318 9..303 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:02 Download gff for FMO11558.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15661358..15661564 34..240 100 -> Plus
3L 15661621..15661682 241..303 96   Plus
3L 15661272..15661296 9..33 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:20 Download gff for FMO11558.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15654458..15654664 34..240 100 -> Plus
arm_3L 15654372..15654396 9..33 100 -> Plus
arm_3L 15654721..15654782 241..303 96   Plus