Clone FMO11559 Report

Search the DGRC for FMO11559

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:59
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33299-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11559.5prime Sequence

542 bp (542 high quality bases) assembled on 2012-05-14

> FMO11559.5prime
CAGTCGACATGTGGAGATTCCTTCTGATTTGTAGTATTCAGCTGATTTGC
GCATCAGAGCATAGTGGCGAAGGATATGGCGATGGTTACGGATACGGCGG
AAGCGGAGGCGGCGGCAGTGGATCACTAGGCAGCGGCGGAGGAGGCGATG
GCCACTTTCACCACCACACACCCACCACGTACTCGGAGATCTCGAAGCAT
GTGCCGGTGCATGTGATCGAAAAGGTGCCACTGCCCATTCCCCATCCGGT
CGCCGTTCAGGTGCCCAACGTAATTCGGCTTCAAATTCCGGAACCCTATG
CCGTCCACGTGCCCGTCCAGCAGGAGATCCATGTGCCGGTGTATAAAATA
GTGCCCGAAATAACCGAAAAGAAGATACCCTACACCGTCGAGAAGCCATA
CCCCGTCGAGGTGGAGAAACCTTATCCCGTCGAGGTGATTAAGCAGATCA
AGATCCCGGTGCCTAAGCCCTATCCTGTTCCGTTTACCATCTACAAACAC
GTCCTGCAAAAGGAGCACGGCTGGGCAAGCTTTCTAGACCAT

FMO11559.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG33299-RC 762 CG33299-RC 46..561 9..524 2580 100 Plus
CG33299-RB 825 CG33299-RB 121..624 21..524 2520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9656720..9657223 21..524 2520 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:43:21 has no hits.

FMO11559.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:23 Download gff for FMO11559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33299-RC 38..561 1..524 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:22 Download gff for FMO11559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33299-RC 38..561 1..524 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:04 Download gff for FMO11559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33299-RC 38..561 1..524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:04 Download gff for FMO11559.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9656720..9657223 21..524 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:22 Download gff for FMO11559.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9656720..9657223 21..524 100   Plus