FMO11561.5prime Sequence
464 bp (464 high quality bases) assembled on 2012-05-14
> FMO11561.5prime
CAGTCGACATGTTCGCTCTCGTATCGCTTTTCATCCTGGGTGTTGGTGCC
GCCGCCGCCATCGAGCTGCCCATCTACCACTCACCCGCGGCCATTGTGAA
GCCACTGCTGAAGACCGTAGAGGTGGAGGCACCTGCCCACTACGATTTCG
CCTACTCGGTGCACGACGAGCACACCGGCGACATCAAGAGCCAGACGGAG
TCGCGGAAGGGCGATCAGGTCCAGGGTCAGTACACGCTGGTCGATGCCGA
TGGCTATCTGCGCACCGTGGACTACACTTCGGATGCCCACAACGGCTTCA
ATGCGGTGGTGCGTCGCGATCCCCTGGGCCAGAAGGTGATCAAGGCTGCG
CCCATTGCCAAGCTCCTGGCTCCCGCACCACTGCCACTGGCCTATGCGGC
ACCCAAGCTCCTCGCGCCCGCTAAACTGCCCCTCGGCCTTTACCATGCAA
GCTTTCTAGACCAT
FMO11561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr30F-RA | 827 | CG31876-RA | 72..509 | 9..446 | 2190 | 100 | Plus |
Cpr30B-RA | 711 | CG3818-RA | 196..324 | 171..299 | 240 | 79.1 | Plus |
Cpr64Ab-RA | 552 | CG15007-RA | 225..363 | 174..312 | 230 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9932590..9933018 | 446..18 | 2145 | 100 | Minus |
2L | 23513712 | 2L | 9543143..9543271 | 171..299 | 240 | 79.1 | Plus |
3L | 28110227 | 3L | 4211069..4211207 | 312..174 | 230 | 77.7 | Minus |
3R | 32079331 | 3R | 6687190..6687298 | 219..327 | 215 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:19 has no hits.
FMO11561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:32 Download gff for
FMO11561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 1..441 | 9..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:53 Download gff for
FMO11561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 60..503 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:29 Download gff for
FMO11561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr30F-RA | 72..515 | 9..454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:29 Download gff for
FMO11561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9932584..9933026 | 9..454 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:53 Download gff for
FMO11561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9932584..9933026 | 9..454 | 98 | | Minus |