Clone FMO11563 Report

Search the DGRC for FMO11563

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15153-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11563.5prime Sequence

1041 bp (1024 high quality bases) assembled on 2012-05-14

> FMO11563.5prime
CAGTCGACATGGATTTCCACCTGCTGATGATTGCACTCGTGCTTGCACCA
GTCTTTACACCTGTCCACTGCCAGGTGGCCTGCAATGCGAGGAGCGGCCC
TGTCCGCCAGAAACGCATCGTTCTCAGCAGCCCGGGAACAGGTGGGCTGG
CCGAGTTGGACACTTGCCAGTACCGCGTGGCGCCGTGGAGCGGCCAGGTG
TGTCAGGTGCGCGTTGATTTCGAGCGTTTGGAGCTGCCGCAGCCGCAGTT
GAATGCCAATTCCGGAGTGCTGGAGTGCGTCGATTTTCTGCAGATACAGC
ATTTCCGGCTGTGCGGTCGCAACAGTGGTCAGCACTTGTATATACCCATT
CGCCGGGGTCAGGAGCTGCAGCTTCTGTTTCGACTGGCCACGTCCCTCGG
CAGGCAGTCCACCTGGCAGCTGACTCTCACCCAACTAGAGTGTCCCAGGG
ACTCCGCCAGGGGTGTAGGTACAAGGCAACCCGAGGTGCAAACACCCACT
GTGCGACCGATTTTGCCCTTTTTGGGTAACTTCCTGCCGCGGACCATCTT
TGGCGGACAATCTGGAATCGGCTCGGGTTCCGGTCCCGCTGCCCAGCTTA
TCCAGACTTTCACATCGCCTTCAAGTGCGGATCTGGAGATGTTGGCACCT
CTGGGCTGTGATCAGTACTACAGGACCACCACTGGCGGAATAGTGAGCTT
CAATTTTGCAGGTGGCGTCTATATGCCCAACATGAAGTACTCGATTTGTG
TCAAGGGAGCGGCAGACAACGAGATAAGCTACAAGATCACGCACTTTGAG
CTCTCGAAGGCGAACTCCGAGCAGCCAGGACCTGCCCTATGACACCGATT
GCCGCAGTACAGTGCTGACTTCCGTTGCGCGTATCTGACTATGTGAGCAT
CCCCGATGCATACATGGTCGGCAGGCCAGAGCTGCAGGCCACTCACTACT
GTGGCAAATGGATTGCCTGGCCAGAGCTAGTGCCCGCCGCTTTTTGTCCT
GCGATTCGCCAGTGATTCGAAGTCCGTGGAACTTGAAACGG

FMO11563.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15153-RA 1317 CG15153-RA 15..1051 5..1041 4915 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18091469..18092242 778..5 3855 99.9 Minus
2L 23513712 2L 18091019..18091267 1025..777 920 95.6 Minus
Blast to na_te.dros performed on 2014-11-28 02:44:27 has no hits.

FMO11563.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:34 Download gff for FMO11563.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1033 9..1041 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:57 Download gff for FMO11563.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 11..1051 1..1041 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:32 Download gff for FMO11563.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 11..1051 1..1041 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:32 Download gff for FMO11563.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18091003..18091265 779..1041 95 <- Minus
2L 18091469..18092243 1..778 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:57 Download gff for FMO11563.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18091003..18091265 779..1041 95 <- Minus
arm_2L 18091469..18092243 1..778 99   Minus