FMO11563.5prime Sequence
1041 bp (1024 high quality bases) assembled on 2012-05-14
> FMO11563.5prime
CAGTCGACATGGATTTCCACCTGCTGATGATTGCACTCGTGCTTGCACCA
GTCTTTACACCTGTCCACTGCCAGGTGGCCTGCAATGCGAGGAGCGGCCC
TGTCCGCCAGAAACGCATCGTTCTCAGCAGCCCGGGAACAGGTGGGCTGG
CCGAGTTGGACACTTGCCAGTACCGCGTGGCGCCGTGGAGCGGCCAGGTG
TGTCAGGTGCGCGTTGATTTCGAGCGTTTGGAGCTGCCGCAGCCGCAGTT
GAATGCCAATTCCGGAGTGCTGGAGTGCGTCGATTTTCTGCAGATACAGC
ATTTCCGGCTGTGCGGTCGCAACAGTGGTCAGCACTTGTATATACCCATT
CGCCGGGGTCAGGAGCTGCAGCTTCTGTTTCGACTGGCCACGTCCCTCGG
CAGGCAGTCCACCTGGCAGCTGACTCTCACCCAACTAGAGTGTCCCAGGG
ACTCCGCCAGGGGTGTAGGTACAAGGCAACCCGAGGTGCAAACACCCACT
GTGCGACCGATTTTGCCCTTTTTGGGTAACTTCCTGCCGCGGACCATCTT
TGGCGGACAATCTGGAATCGGCTCGGGTTCCGGTCCCGCTGCCCAGCTTA
TCCAGACTTTCACATCGCCTTCAAGTGCGGATCTGGAGATGTTGGCACCT
CTGGGCTGTGATCAGTACTACAGGACCACCACTGGCGGAATAGTGAGCTT
CAATTTTGCAGGTGGCGTCTATATGCCCAACATGAAGTACTCGATTTGTG
TCAAGGGAGCGGCAGACAACGAGATAAGCTACAAGATCACGCACTTTGAG
CTCTCGAAGGCGAACTCCGAGCAGCCAGGACCTGCCCTATGACACCGATT
GCCGCAGTACAGTGCTGACTTCCGTTGCGCGTATCTGACTATGTGAGCAT
CCCCGATGCATACATGGTCGGCAGGCCAGAGCTGCAGGCCACTCACTACT
GTGGCAAATGGATTGCCTGGCCAGAGCTAGTGCCCGCCGCTTTTTGTCCT
GCGATTCGCCAGTGATTCGAAGTCCGTGGAACTTGAAACGG
FMO11563.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15153-RA | 1317 | CG15153-RA | 15..1051 | 5..1041 | 4915 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18091469..18092242 | 778..5 | 3855 | 99.9 | Minus |
2L | 23513712 | 2L | 18091019..18091267 | 1025..777 | 920 | 95.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:44:27 has no hits.
FMO11563.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:34 Download gff for
FMO11563.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15153-RA | 1..1033 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:57 Download gff for
FMO11563.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15153-RA | 11..1051 | 1..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:32 Download gff for
FMO11563.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15153-RA | 11..1051 | 1..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:32 Download gff for
FMO11563.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18091003..18091265 | 779..1041 | 95 | <- | Minus |
2L | 18091469..18092243 | 1..778 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:57 Download gff for
FMO11563.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18091003..18091265 | 779..1041 | 95 | <- | Minus |
arm_2L | 18091469..18092243 | 1..778 | 99 | | Minus |