Clone FMO11567 Report

Search the DGRC for FMO11567

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42834-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11567.5prime Sequence

392 bp (392 high quality bases) assembled on 2012-05-14

> FMO11567.5prime
CAGTCGACATGGCTCTTCGTATTATTTTTGTCTTCATTGCCACAATCGTC
CTGGCGCAAGGATCAAATATTTCGCCAGTTGCGCAGGAGAATCTTGTGCG
GGTCCATCACTCTGGAGTGGTTTCATCTGGAGCTCCTGCCGTTGGTGTTA
CCCAGAGCCGCTCAGTTGTTTCGCAAGCTCAGCGTCCTAACTATGGTCAG
AGATCCATCTCTGGATCTATCGGAGGATCTCGTCGAGTGGGCGAAGTTCC
AGTGTCCGGATCTCGTCCTCATGGTGGTGCTCCTCGTCGTTCTTCTGCAA
GCGCTTATGCTCGTCCCATCGGAGGTGGAGCTACCCCAGGATATGTCCAC
CGCAACCGCAACCAGAAACCATATGCAAGCTTTCTAGACCAT

FMO11567.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG42834-RA 536 CG42834-RA 27..392 9..374 1830 100 Plus
CG14332-RA 513 CG14332-RA 220..354 202..336 225 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17418785..17419150 9..374 1830 100 Plus
3R 32079331 3R 17421849..17421983 336..202 225 77.8 Minus
Blast to na_te.dros performed on 2014-11-28 02:44:43 has no hits.

FMO11567.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:36 Download gff for FMO11567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42834-RA 1..369 9..375 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:06 Download gff for FMO11567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42834-RA 20..392 1..374 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:39 Download gff for FMO11567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42834-RA 20..392 1..374 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:39 Download gff for FMO11567.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17418778..17419150 1..374 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:06 Download gff for FMO11567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13244500..13244872 1..374 98   Plus