Clone FMO11569 Report

Search the DGRC for FMO11569

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:69
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32198-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11569.5prime Sequence

434 bp (434 high quality bases) assembled on 2012-05-14

> FMO11569.5prime
CAGTCGACATGTGTTCCAAACTAACTCTTTTCCTGGGGTTAGTGGCCCTC
ATTGCTGCTGTCTTTGCTCTTGATGATCCCACATCGCCGACATCCCCAAC
ATCTCCAACATCTCCAACTTCGCCGACTTCTCCAACTTCGCCGACTTCTC
CAACTTCTCCCACTTCTCCTACATCACCAACTTCACCAACAACGCCAGAT
GCCTCTACTGCCACCACTGCCGCCCCCTCTACGGCATCCACTACCACAGA
AAGGACTCGCAGACGCAGGCGCAGGCGCAGGATAATCCGGATCCGCAGGT
TCAGGGGCGGCAACCGCCGTCGTGGATTCGGTAGACGCAGATTCGGTGGT
CGCCGGTTCGGTGAGGGAGGTGTCCGTGAAGTCGTGATCCGTGAGCGCGG
ATTGGAGCGCCTCCTTGCAAGCTTTCTAGACCAT

FMO11569.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32198-RB 470 CG32198-RB 15..422 9..416 2040 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18526990..18527397 9..416 2040 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:44:51 has no hits.

FMO11569.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:38 Download gff for FMO11569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 1..411 9..420 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:11 Download gff for FMO11569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 6..431 1..428 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:43 Download gff for FMO11569.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32198-RB 6..431 1..428 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:43 Download gff for FMO11569.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18526981..18527406 1..428 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:11 Download gff for FMO11569.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18520081..18520506 1..428 98   Plus