Clone FMO11572 Report

Search the DGRC for FMO11572

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12479-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11572.5prime Sequence

248 bp (248 high quality bases) assembled on 2012-05-14

> FMO11572.5prime
CAGTCGACATGTCGACTACTCCAGAGGATCGGCTGCGTGAGAACATCAAT
CGATGCCTCTCGGATTCCCTGGTGAAGGGAGTTGGTGGTCTGGTGATCGG
ATCCGTGGTCACCCTGCTCTTCTTCCGTAGGCGCATATGGCCCGTCTGGC
TGGGCACTGGATTCGGCGTGGGCGTGGCATATCGTGGCTGTGAAAAGGAG
CTCAACGATGTAAAGTTTGGCCAACGAAAGGCAAGCTTTCTAGACCAT

FMO11572.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12479-RA 428 CG12479-RA 93..314 9..230 1110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14151693..14151914 230..9 1110 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:44:15 has no hits.

FMO11572.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:32 Download gff for FMO11572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12479-RA 93..321 9..238 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:25:50 Download gff for FMO11572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12479-RA 93..321 9..238 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:28 Download gff for FMO11572.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12479-RA 93..321 9..238 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:28 Download gff for FMO11572.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14151686..14151914 9..238 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:25:50 Download gff for FMO11572.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14045719..14045947 9..238 98   Minus