FMO11573.5prime Sequence
740 bp (740 high quality bases) assembled on 2012-05-14
> FMO11573.5prime
CAGTCGACATGTGGAACTATCGTCAGAAAGTTGATTTGGAAACATCGGTA
AAGATATCGCCGTATTGCAATTCTTGGCCATCGGCTTGTTGGTTTACTCT
TAAAGGCATTGATTTGTTGAAACTTCTGGTATTGGAAAGATCACCAACTT
ACCTGGTGATTCTTACGATTGTCCTTATCGTACTCCTCTTACTTGTATTT
AAAAGATTCAAACACAAATGGAACGATGTGCCTATGTCGGAGATTGAGTC
ACTGAGAAAACGTGTTAAGTTTGTAACCAAGGATATGGCCATGCTGCAAG
AAGCCCTAAATTCGACCGTAATACCCAAGCCGCCGCTAGCGATTTCTGAT
GATATTAGGAGTAATATTAATTACTTGGATGAACCAGAGTCCAACGCAAA
TGATGACAAACTTTCAGAATTTAAAGAAATCTTTGATCCTTTCCCCCCAG
AATTCGACAAAATTAGTGAAACTAAAGCGCTAGTACGAGAAGAAAATAAA
CCGGAGCCTGTGATTCCAGACGCCGAACCTCGAGAAGATTCCGTAGTAAA
AAATAGGGTGCGATTTGCTCTAACAGATCAGGGAAAACCAGCCAAAGATG
AGACCAAGCACATTAATATAGCGAAACCCACGAAGATTATAGCTGAAAAT
AATGTATCCGTGGAAAATAGAAATATGCGTAAACGGTCATCTCCTTCAAA
CACGAAAACGGGATGGAAGCTCGCAAGCTTTCTAGACCAT
FMO11573.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32141-RA | 913 | CG32141-RA | 112..825 | 9..722 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14203712..14204206 | 228..722 | 2475 | 100 | Plus |
| 3L | 28110227 | 3L | 14203434..14203654 | 9..229 | 1105 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 766..816 | 388..439 | 113 | 71.2 | Plus |
FMO11573.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:40 Download gff for
FMO11573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32141-RA | 1..717 | 9..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:18 Download gff for
FMO11573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32141-RA | 112..825 | 9..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:48 Download gff for
FMO11573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32141-RA | 112..825 | 9..722 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:48 Download gff for
FMO11573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14203434..14203652 | 9..227 | 100 | -> | Plus |
| 3L | 14203712..14204206 | 228..722 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:18 Download gff for
FMO11573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14196534..14196752 | 9..227 | 100 | -> | Plus |
| arm_3L | 14196812..14197306 | 228..722 | 100 | | Plus |
