FMO11575.5prime Sequence
482 bp (482 high quality bases) assembled on 2012-05-14
> FMO11575.5prime
CAGTCGACATGTACTGGATTTTGCTGTTGACGTCTCTCTTGCCATGGCAT
CCCCATGCAACTGCCCAATTTCTGGAACCCGATTGTGGATATATGTCACC
GGAGGCACTCCAAAATGAGGAGCACCAGGCGCACATATCCGAGAGTCCTT
GGATGGCTTACTTGCACAAATCTGGCGAGCTTGTATGTGGCGGAACTCTC
GTAAATCATCGATTCATCCTGACAGCAGCACATTGCATACGAGAGGATGA
AAACTTGACTGTGCGACTGGGCGAGTTCAACAGCTTAACTAGTATCGACT
GCAACGGCTCCGATTGCCTGCCACCTTCCGAGGATTTTGAAATAGATGTG
GCCTTCAGGCATGGGGGCTATTCCAGAACCAATAGGATCCACGACATTGG
ACTTCTCCGGCTGGCCAAGTCGGTGGAGTATAAAGGTTCAAGATACATAG
ATGGCACACATGTAGCAAGCTTTCTAGACCAT
FMO11575.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30286-RC | 967 | CG30286-RC | 12..467 | 9..464 | 2280 | 100 | Plus |
| CG30286-RB | 904 | CG30286-RB | 12..438 | 9..435 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21536216..21536423 | 464..257 | 1040 | 100 | Minus |
| 2R | 25286936 | 2R | 21536582..21536784 | 211..9 | 1015 | 100 | Minus |
| 2R | 25286936 | 2R | 21536481..21536527 | 257..211 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:45:09 has no hits.
FMO11575.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:41 Download gff for
FMO11575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 4..467 | 1..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:23 Download gff for
FMO11575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 4..467 | 1..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:52 Download gff for
FMO11575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30286-RC | 4..467 | 1..464 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:52 Download gff for
FMO11575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21536216..21536423 | 257..464 | 100 | <- | Minus |
| 2R | 21536482..21536527 | 211..256 | 100 | <- | Minus |
| 2R | 21536583..21536788 | 1..210 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:23 Download gff for
FMO11575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17423721..17423928 | 257..464 | 100 | <- | Minus |
| arm_2R | 17423987..17424032 | 211..256 | 100 | <- | Minus |
| arm_2R | 17424088..17424293 | 1..210 | 98 | | Minus |
