Clone FMO11582 Report

Search the DGRC for FMO11582

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:82
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42798-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11582.5prime Sequence

317 bp (317 high quality bases) assembled on 2012-05-14

> FMO11582.5prime
CAGTCGACATGAACTCGCTCATTGTAATTTTTGGATTTCTTTTTATCTCA
ACTCAGATAGTCGCAACAACCGAGTCGGAATGTCCTGAAATCTGTCTTGC
AATTTACAGTCCGGTCTGTGAAGAAGCTATGATAAATGGAAAATTGGTTA
GATGCTTATTCAGTAATAGCTGCGAAGCAGGTCGTAGCGCATGTCTTCAT
GAAATAAATTGGCGCCAAAAAGAAGGAAAATGTGAAACTTCACCCGACCA
CTTATGCCGTCAATACCTTTCATCTAAAAATATTACTTCAAAAGTAAGCG
CAAGCTTTCTAGACCAT

FMO11582.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG42798-RA 500 CG42798-RA 18..308 9..299 1455 100 Plus
CG42798-RB 527 CG42798-RB 92..335 56..299 1220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17407001..17407199 9..207 995 100 Plus
3R 32079331 3R 17407251..17407342 208..299 460 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:44:54 has no hits.

FMO11582.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:38 Download gff for FMO11582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42798-RA 18..317 9..308 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:13 Download gff for FMO11582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42798-RA 18..317 9..308 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:45 Download gff for FMO11582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42798-RA 18..317 9..308 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:45 Download gff for FMO11582.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17407001..17407199 9..207 100 -> Plus
3R 17407251..17407351 208..308 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:13 Download gff for FMO11582.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13232723..13232921 9..207 100 -> Plus
arm_3R 13232973..13233073 208..308 96   Plus