FMO11582.5prime Sequence
317 bp (317 high quality bases) assembled on 2012-05-14
> FMO11582.5prime
CAGTCGACATGAACTCGCTCATTGTAATTTTTGGATTTCTTTTTATCTCA
ACTCAGATAGTCGCAACAACCGAGTCGGAATGTCCTGAAATCTGTCTTGC
AATTTACAGTCCGGTCTGTGAAGAAGCTATGATAAATGGAAAATTGGTTA
GATGCTTATTCAGTAATAGCTGCGAAGCAGGTCGTAGCGCATGTCTTCAT
GAAATAAATTGGCGCCAAAAAGAAGGAAAATGTGAAACTTCACCCGACCA
CTTATGCCGTCAATACCTTTCATCTAAAAATATTACTTCAAAAGTAAGCG
CAAGCTTTCTAGACCAT
FMO11582.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:44:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42798-RA | 500 | CG42798-RA | 18..308 | 9..299 | 1455 | 100 | Plus |
CG42798-RB | 527 | CG42798-RB | 92..335 | 56..299 | 1220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17407001..17407199 | 9..207 | 995 | 100 | Plus |
3R | 32079331 | 3R | 17407251..17407342 | 208..299 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:44:54 has no hits.
FMO11582.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:38 Download gff for
FMO11582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42798-RA | 18..317 | 9..308 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:13 Download gff for
FMO11582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42798-RA | 18..317 | 9..308 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:45 Download gff for
FMO11582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42798-RA | 18..317 | 9..308 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:45 Download gff for
FMO11582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17407001..17407199 | 9..207 | 100 | -> | Plus |
3R | 17407251..17407351 | 208..308 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:13 Download gff for
FMO11582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13232723..13232921 | 9..207 | 100 | -> | Plus |
arm_3R | 13232973..13233073 | 208..308 | 96 | | Plus |