Clone FMO11585 Report

Search the DGRC for FMO11585

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:85
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42659-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11585.5prime Sequence

173 bp (-90 high quality bases) assembled on 2012-05-14

> FMO11585.5prime
CAGTCGACATGGTTTACTTAAGTCGTCCTTGGACTCCGGCCATAAACCCT
TTCTACATTGGCCCCTATCCGAGATGCGCAGTATGTCCGTGCAACTTCGA
CATTTACAAAGGATACACCCCCGGTGGCTGGCACAGTCTTTGCTATAGCA
GCTATGCAAGCTTTCTAGACCAT

FMO11585.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG42659-RB 429 CG42659-RB 155..301 9..155 720 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18007568..18007714 9..155 720 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 02:45:46 has no hits.

FMO11585.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:47 Download gff for FMO11585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42659-RB 155..301 9..155 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:42 Download gff for FMO11585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42659-RB 155..301 9..155 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:07 Download gff for FMO11585.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42659-RB 155..301 9..155 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:07 Download gff for FMO11585.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18007568..18007720 9..160 96 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:42 Download gff for FMO11585.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18007568..18007720 9..160 96 -> Plus