FMO11586.5prime Sequence
758 bp (758 high quality bases) assembled on 2012-05-14
> FMO11586.5prime
CAGTCGACATGCGCGACCAATTCATCAGCCTGGCCCTGATTCTGTGCGTC
CTGCACAGCGCCTGCGGCTTGTACTTCCACATATCGCAGACGGAGCGCAA
GTGCTTCATCGAGGAGGTTCCCGACGAGACAACTGTGATTGTTAACTACA
AGGTAGAGCTGTATGATCCGCGCTCTAATGGATTCATGCCCTCGTCGCCC
GGAATCGGCATGCATGTGGAAGTACGCGACAGCGACGACAAGATTGTGCT
GTCCCGCGTGTACAGCTCACAGGGCCGCATCTCGTTCACCTCGCACACTC
CTGGCGAGCACGTCATCTGCATGTTCTCGAACAGCACCGCGTGGTTCAGT
GGTGCCCAGCTGCGTGTTCACCTGGACATCCAGGTGGGAGAGCACGCTAT
CGACTACGCCCATGTGGCGCAGAAGGAGAAACTGACTGATCTGCAGCTGC
GCATCCGCCAGCTACTTGACCAGGTGGAGCAGATCACCAAGGAGCATAAC
TACCAGCGATACCGCGAGGAGCGGTTCCGTCACACCAGCGAGAGCACCAA
CTCCCGCGTGCTCTGGTGGTCGCTGGCCCAGACCGTCGTCTTGGTTTGCA
TGGGCTTCTGGCATCTATTTAACCTGTTCCACACTTGTGTGTACATTAAC
GAGCAGTGTTTGTGTGTGTGCTGTCTTTATATAAAGAAAATATCTGCCCT
TGGCCTTATCAATGATAAGATTAATGGCTTGCCAGACCCGGCAAGCTTTC
TAGACCAT
FMO11586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Unc-115b-RE | 3535 | CG31332-RE | 77..808 | 9..740 | 3630 | 99.7 | Plus |
p24-2-RB | 3535 | CG33105-RB | 77..808 | 9..740 | 3630 | 99.7 | Plus |
p24-2-RA | 830 | CG33105-RA | 96..827 | 9..740 | 3630 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9691906..9692505 | 740..141 | 2970 | 99.7 | Minus |
3R | 32079331 | 3R | 9684713..9685185 | 613..141 | 2335 | 99.6 | Minus |
3R | 32079331 | 3R | 9692567..9692699 | 141..9 | 665 | 100 | Minus |
3R | 32079331 | 3R | 9685247..9685379 | 141..9 | 650 | 99.2 | Minus |
3R | 32079331 | 3R | 9699792..9699920 | 740..612 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:45:50 has no hits.
FMO11586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:48 Download gff for
FMO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
unc-115-RE | 68..808 | 1..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:45 Download gff for
FMO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Unc-115b-RE | 68..808 | 1..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:08 Download gff for
FMO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
p24-2-RA | 87..830 | 1..743 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:08 Download gff for
FMO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9691906..9692504 | 142..740 | 99 | <- | Minus |
3R | 9692567..9692707 | 1..141 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:45 Download gff for
FMO11586.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5517628..5518226 | 142..740 | 99 | <- | Minus |
arm_3R | 5518289..5518429 | 1..141 | 97 | | Minus |