FMO11587.5prime Sequence
749 bp (749 high quality bases) assembled on 2012-05-14
> FMO11587.5prime
CAGTCGACATGGCACTGCTTGAGTACGTGGATAACAGGGGACGGCGGGAA
CTCAGTTGCGGTGGCAGTTTGATCAACAATCGTTACGTTCTTACCGCCGC
CCATTGCGTCATTGGTGCGGTGGAAACGGAAGTAGGTCACCTAACTACCG
TTCGGTTGGGGGAATACGATACCAGCAAGGACGTGGACTGCATAGATGAC
ATTTGCAACCAGCCCATCCTACAATTGGGCATCGAACAGGCCACTGTACA
TCCCCAATATGATCCTGCCAACAAGAACCGCATTCACGACATTGCCTTAT
TGCGATTAGATCGGCCCGTTGTGCTTAATGAGTATATTCAGCCGGTTTGT
TTGCCTTTGGTAAGCACACGAATGGCAATCAATACCGGGGAGCTCTTGGT
GGTCAGCGGGTGGGGCCGAACCACAACAGCCCGCAAGAGCACCATAAAGC
AGCGATTGGATCTGCCGGTGAATGACCACGATTACTGCGCACGAAAGTTC
GCCACGAGGAATATCCACCTGATCAGTTCCCAGCTCTGTGTTGGCGGGGA
ATTCTACCGCGACAGCTGTGATGGCGACTCCGGCGGACCGCTGATGCGAA
GGGGTTTTGACCAGGCTTGGTACCAGGAGGGCGTGGTCTCCTTTGGCAAC
CGCTGCGGACTAGAGGGTTGGCCAGGTGTCTACACTCGGGTAGCCGACTA
CATGGACTGGATCGTGGAGACCATTCGTCCCGCAAGCTTTCTAGACCAT
FMO11587.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sp7-RF | 1565 | CG3066-RF | 606..1328 | 9..731 | 3615 | 100 | Plus |
| Sp7-RE | 1418 | CG3066-RE | 606..1328 | 9..731 | 3615 | 100 | Plus |
| Sp7-RA | 1851 | CG3066-RA | 1039..1761 | 9..731 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7763033..7763336 | 428..731 | 1520 | 100 | Plus |
| 3R | 32079331 | 3R | 7762635..7762921 | 143..429 | 1435 | 100 | Plus |
| 3R | 32079331 | 3R | 7762457..7762565 | 34..142 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:45:55 has no hits.
FMO11587.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:48 Download gff for
FMO11587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sp7-RC | 1127..1854 | 9..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:47 Download gff for
FMO11587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sp7-RA | 1039..1766 | 9..737 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:11 Download gff for
FMO11587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sp7-RA | 1039..1766 | 9..737 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:11 Download gff for
FMO11587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7762635..7762921 | 143..429 | 100 | -> | Plus |
| 3R | 7763035..7763341 | 430..737 | 99 | | Plus |
| 3R | 7762369..7762393 | 9..33 | 100 | -> | Plus |
| 3R | 7762457..7762565 | 34..142 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:47 Download gff for
FMO11587.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3588091..3588115 | 9..33 | 100 | -> | Plus |
| arm_3R | 3588179..3588287 | 34..142 | 100 | -> | Plus |
| arm_3R | 3588357..3588643 | 143..429 | 100 | -> | Plus |
| arm_3R | 3588757..3589063 | 430..737 | 99 | | Plus |
