FMO11590.5prime Sequence
320 bp (320 high quality bases) assembled on 2012-05-14
> FMO11590.5prime
CAGTCGACATGCCTTCCGTCGAGTGGGTCTGTGGTTTGCTCTACTACGTT
ATGCGCACCTACATAAAGGTATTCGTATCCAGTTGCGAAGCACACTTCCC
TATCGATATCCTTGACAAGATTGTGTATTTGATAGATTTCGCCGAAGTTT
CCATGAAGATAATGCGCCGGCCAAGAAATTACACGAATCCGACTGAGCGC
CAAGCGAGACGCCTTCAATTCTACAATTTCCTTTTAAAGTTAAGATTTTT
GGCACAGGTGATCTACACCTTGGTAGCCGTGGTAATTGGGACACTTAAAA
CAGCAAGCTTTCTAGACCAT
FMO11590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42766-RB | 732 | CG42766-RB | 111..409 | 4..302 | 1480 | 99.7 | Plus |
| CG42766-RA | 626 | CG42766-RA | 111..388 | 4..281 | 1375 | 99.6 | Plus |
| CG43076-RA | 771 | CG43076-RA | 110..372 | 19..281 | 325 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15977153..15977337 | 118..302 | 925 | 100 | Plus |
| X | 23542271 | X | 15976978..15977093 | 4..119 | 565 | 99.1 | Plus |
| X | 23542271 | X | 15223143..15223286 | 287..144 | 210 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:46:07 has no hits.
FMO11590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:50 Download gff for
FMO11590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42766-RB | 107..412 | 1..306 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:55 Download gff for
FMO11590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42766-RB | 107..418 | 1..311 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:17 Download gff for
FMO11590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42766-RB | 107..418 | 1..311 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:17 Download gff for
FMO11590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15976974..15977093 | 1..119 | 97 | -> | Plus |
| X | 15977155..15977346 | 120..311 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:55 Download gff for
FMO11590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15871007..15871126 | 1..119 | 97 | -> | Plus |
| arm_X | 15871188..15871379 | 120..311 | 97 | | Plus |
