Clone FMO11595 Report

Search the DGRC for FMO11595

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:115
Well:95
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42512-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11595.5prime Sequence

354 bp (354 high quality bases) assembled on 2012-05-14

> FMO11595.5prime
CAGTCGACATGGAGAACAAAAAATGATATAAAAGAAATGGACCTGGGCCT
ATCTCGAGCAGATATGTTGGAACAGCTCGAAAAAAGGCGAATATTTCTGG
GCGATGGCAAGGATATGCCGCTGGATCGTCTGGAGGATATCTACCGCAAT
TACATAGTTCCCAAGCCAAAAAGAGAGCGCAAGCCGCGCAATCCAAGTCC
CGATCCCAATTTCAATCCCATTGAAATAGAGCAGCTAGCGGAGCGCATCA
AGTCGGTTGTCATAGTGGGACAGAAACGAGCGCATGCAGAGAATAAGAGC
GACGACCAGGCCAAGCAAATCAAGATGGACCTGGACGCAAGCTTTCTAGA
CCAT

FMO11595.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42512-RB 617 CG42512-RB 81..407 9..336 1615 99.7 Plus
CG42512-RA 1782 CG42512-RA 81..407 9..336 1615 99.7 Plus
CG32573-RA 1782 CG32573-RA 81..407 9..336 1615 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16651587..16651838 85..336 1260 100 Plus
X 23542271 X 16651465..16651530 19..84 330 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:45:38 has no hits.

FMO11595.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:46 Download gff for FMO11595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 81..413 9..343 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:39 Download gff for FMO11595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 81..413 9..343 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:04 Download gff for FMO11595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32573-RA 81..413 9..343 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:04 Download gff for FMO11595.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16651456..16651530 9..84 98 -> Plus
X 16651587..16651844 85..343 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:39 Download gff for FMO11595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16545489..16545563 9..84 98 -> Plus
arm_X 16545620..16545877 85..343 98   Plus