FMO11596.5prime Sequence
406 bp (406 high quality bases) assembled on 2012-05-14
> FMO11596.5prime
CCCAGTCGACATGAAGTACCTAATGTTAATTGCCCTTTTTGTGGTCGCTG
CTTCGGCGACGGACAACGATGATCCGATTTCCCAGGAATCCAATGTGGAG
TACAATGGCAAATACCATTATCATTATGAGCTCAAAGATGGCTCGAAGGC
CACTCAGGATGGAGTCTTGAAGTCCGTGAATGCCGATCACAACGGGGAGT
CGGTCAATGGAAAGTACTCCTTCGTCGCCGACGATGGAAAGACCTATGTT
GTGTCCTACACGGCGGACGAGAACGGATACCTTGCGGTGGGTGACCACCT
GCCCACACCGCCACCCACGCCGGTGTCCGTTCTGAAGGCTCTGGAGTACA
TCCGCCTGCATCCGTACAAGACGCCCGAGCAGAAGCAAGCAAGCTTTCTA
GACCAT
FMO11596.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr49Af-RB | 1056 | CG8510-RB | 73..451 | 10..388 | 1895 | 100 | Plus |
| Cpr49Af-RA | 533 | CG8510-RA | 73..451 | 10..388 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12406176..12406440 | 124..388 | 1325 | 100 | Plus |
| 2R | 25286936 | 2R | 12406004..12406117 | 10..123 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:45:42 has no hits.
FMO11596.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-14 09:59:46 Download gff for
FMO11596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr49Af-RA | 1..381 | 11..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:26:41 Download gff for
FMO11596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr49Af-RA | 68..454 | 1..392 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:06 Download gff for
FMO11596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr49Af-RA | 68..454 | 1..392 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:06 Download gff for
FMO11596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12405999..12406117 | 1..123 | 96 | -> | Plus |
| 2R | 12406176..12406443 | 124..392 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:26:41 Download gff for
FMO11596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8293504..8293622 | 1..123 | 96 | -> | Plus |
| arm_2R | 8293681..8293948 | 124..392 | 99 | | Plus |
