FMO11606.5prime Sequence
638 bp (633 high quality bases) assembled on 2012-05-29
> FMO11606.5prime
CAGTCGACATGAAGGGTTTTAACGACTTCAAGCGAATTGCGGTCGTTTGC
ATACCCAGCGAAGATGAATTGAAACGTCGCATCGCCGAAAAAGAGGAAAA
GGGAAATGCTTTTACAGTTAAAGAATCAACAATTAATAATTTACGAGCCA
ACTTCACACTTCCCTCGCTGGAGTTTGGCTGGTTCGATGATATAAACTAC
ACGGAGCTGACTGGTGACGAGGCCAAGAGCGAGGTCAAGAAGTACAACGA
GAAGGGCAAAAAGGCCATTGACGCGGAGAGGTCGCGTGACAAGAGATCCC
GAGGAAGTCGCGACAACTATCGTCGTGATGACCGGAACCGGAATCGATAC
AATGATGACCGACGTCGTGATTATGGCGGCCAGCGGCACGAAAGTCGTTG
GAGCGACTCCCGCAGGGGAGGCGGCGGTGGCGGTTACTCCTTCAATAGTG
GTGGAGGCGGCAGTCGTGGCTACGACAATCGCCGCAACTACAACAGCGGT
AGCGGTGGCCAGCAAAATTGGGTGCAGAACAGCCGCAGAAGCGGGTACGA
TGATCGCGGCTATGGTGGCGGTGGAAGCGGCAGTCGTGGATACGACAATC
GCAACCGTGGATACGCAGGCGGCAGCGGTGGTGGAGGC
FMO11606.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30122-RD | 4620 | CG30122-RD | 2720..3349 | 9..638 | 3105 | 99.5 | Plus |
| CG30122-RC | 4623 | CG30122-RC | 2720..3349 | 9..638 | 3105 | 99.5 | Plus |
| CG30122-RB | 4620 | CG30122-RB | 2720..3349 | 9..638 | 3105 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18633795..18634287 | 638..146 | 2420 | 99.4 | Minus |
| 2R | 25286936 | 2R | 18634770..18634908 | 147..9 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:57:17 has no hits.
FMO11606.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:51 Download gff for
FMO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30122-RD | 2712..3347 | 1..638 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:37 Download gff for
FMO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30122-RB | 2714..3349 | 1..638 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:38 Download gff for
FMO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30122-RB | 2714..3349 | 1..638 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:38 Download gff for
FMO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18633795..18634285 | 148..638 | 99 | <- | Minus |
| 2R | 18634770..18634914 | 1..147 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:37 Download gff for
FMO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14522275..14522419 | 1..147 | 97 | | Minus |
| arm_2R | 14521300..14521790 | 148..638 | 99 | <- | Minus |
