FMO11619.5prime Sequence
1001 bp (915 high quality bases) assembled on 2012-05-29
> FMO11619.5prime
CAGTCGACATGGGCAAGGATCAGGAGTTCCTGGAGGCGGCGCGCAATGGA
AACATTTCGCACATCGAAAAGGTGCTAACACAGAAGGCGAAAAGGGCAGG
ACCGCTGGCCAGTCTGCGTCGTGGCACCGGGGTAAATGTCCAGGACAGTG
GTGGCTACTCCGCCCTGCATCATGCCTGCCTGAATGGCCATGAGGATATA
GTGCGTCTGTTGCTGGCACACGAGGCCTCGCCAAATTTGCCGGACTCCCG
GGGATCCTCGCCACTCCACTTGGCCGCCTGGGCTGGTGAAACGGAGATTG
TGCGGCTCCTGCTGACGCATCCGTATCGACCGGCCAGTGCCAATCTGCAG
ACAATAGAGCAGGAGACACCACTGCATTGTGCGGCTCAACATGGTCACAC
GGGAGCACTTGCCCTGCTGTTGCATCACGATGCCGATCCCAACATGCGCA
ATTCCCGGGGAGAAACCCCTCTGGATTTGGCCGCACAATATGGCCGATTG
CAGGCGGTTCAAATGCTTATACGTGCCCATCCGGAATTGATAGCACATCT
GGGCACCGAGGCCTTGGAACGGGGCACACCATCACCATCGTCGCCAGCAT
CGCCGAGTAGAGCCATCTTTCCGCACACCTGTCTGCATTTGGCCAGTCGC
AATGGGCACAAAAGCGTGGTGGAGGTCCTATTGTCCGCCGGAGTTAGTGT
CAATTTGCTAACTCCATCGGGAACTGCACTGCATGAAGCAGCTCTGTGTG
GCAAGGAGAATGTGGTCAGGACACTATTGAAAGCTGGCATCAATTTGAAT
GCCACAGACCATGAAGGACGCACTGCCCTGACATTCTGCGCAAATTTCAC
CGCATGCACCAACCATTGTGGCTGTGATCAACACTTCCGTAACCAAATGG
ATACAGATGAGGCGACGAGGTGATCTACAGCAACATCCGCGACCACCCAA
TCGGACGTGGCAAACAGCACATCGCAACATCGCCCCCCTTACATCACTAC
C
FMO11619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4393-RD | 5931 | CG4393-RD | 293..1304 | 9..1001 | 4515 | 97.6 | Plus |
| CG4393-RC | 4515 | CG4393-RC | 160..1171 | 9..1001 | 4515 | 97.6 | Plus |
| CG4393-RB | 4648 | CG4393-RB | 293..1304 | 9..1001 | 4515 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23381654..23382533 | 883..9 | 4140 | 99.1 | Minus |
| 3R | 32079331 | 3R | 23381312..23381360 | 930..883 | 195 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:57:48 has no hits.
FMO11619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:57 Download gff for
FMO11619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4393-RB | 293..1267 | 9..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:57 Download gff for
FMO11619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4393-RB | 293..1267 | 9..970 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:53 Download gff for
FMO11619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4393-RB | 293..1267 | 9..970 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:53 Download gff for
FMO11619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23381654..23382533 | 9..883 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:57 Download gff for
FMO11619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19207376..19208255 | 9..883 | 99 | | Minus |
