FMO11621.5prime Sequence
280 bp (280 high quality bases) assembled on 2012-05-29
> FMO11621.5prime
CAGTCGACATGTACGCCGGTCGGGCGACACAATTTGCCAAAACCATCAGC
AGCATGGCGTGCAGCATACAGAAGCAACCTCAAGCTCCGCAATCAGTGGA
TCCTGGCACTGCAGCAGTGGATCGGGTGGGTGGAGGAGGCGGTGGCCCCA
GTTTTGCTGGCACCGTTCCCTCCACGCCGAAAGCCAAGACCGCCCAGCCG
AGGGGCTCCCTGCCAACGGACGTGAACCAGCCACCGTTGGAATTTCAGTG
GCCACCGCCCGTTCCCGTTTCGATACAACG
FMO11621.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43861-RD | 3486 | CG4-RD | 721..989 | 9..277 | 1300 | 98.9 | Plus |
| CG43861-RC | 2686 | CG43861-RC | 721..989 | 9..277 | 1300 | 98.9 | Plus |
| CG43861-RB | 2907 | CG43861-RB | 721..989 | 9..277 | 1300 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19971548..19971816 | 277..9 | 1300 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:57:51 has no hits.
FMO11621.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:57 Download gff for
FMO11621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13966-RB | 714..993 | 1..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:59 Download gff for
FMO11621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43861-RA | 714..993 | 1..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:55 Download gff for
FMO11621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43861-RB | 714..993 | 1..280 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:55 Download gff for
FMO11621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19971544..19971823 | 1..280 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:59 Download gff for
FMO11621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19971544..19971823 | 1..280 | 97 | | Minus |
