FMO11622.5prime Sequence
934 bp (894 high quality bases) assembled on 2012-05-29
> FMO11622.5prime
CAGTCGACATGCTTTTGAAATTCACAAAAACCAGTGGCGCTGGACCCTCG
GCCGTACCGCTACTGACCACCGCCCCCGCGACAGTCACCAGTTCGGCGTC
CATGCAGGCAACAACAACAAGTTACGCGGCCCGTGGAACAGGCATGAGAA
TGACCATGTCCACCAATTCCACAATGAGTGCGCGTATACATCGAAAAGGA
TTTCGCATACCATCGAAAAGACAGCCGGGTAAGGGATTGCCCGGCAAGTT
GCACACCATAACCAGGACGGGTCCTGGCAAAATGGTTCCTGGGAAGCGAA
TACCACAGCGACCCCATCCGCCGCCCTGCGACAACTCGAACGACAGTGGG
CTGGGTTTCGATCAGCACACGGAGCTGAGATCCTCGGCAGGAGCTGGGGG
CGTTACTGATCCGGCGGCCAATGGAGGCAGTGGCTCCAACTCTGGCCAGC
GATCCAGTTTGCTGGTCAATAGCGCTTTAACCAACACAGTGGCTGCTGCA
GCAGCCGCAGCAGCTGCCGCGGTGGCCAGCAACACGTTGCAGCAGCATCA
GCAGCACCATCAACAGCAGCAGCAGCAACAGCAGCAACAACAGCAGCAGC
AGCAGCAACAACAACAACAGCAGCAGCAGCAACAACATTCACCGCAGCAG
CATTTAATCAGAGCGATACCTGTATCAAGATTCATATCGGCCAGGGAATG
TCACGCGTGTGGCGAACAAACGTCAACCCACTACACCGCTGAACAGCGTC
GCCAGCTCCACGATGGCCAGGTGCAGCTGGAGATTTTGTCGCAGCCGGAG
CACCAGCACCGGGCTCGCTACCAAACGGAGGGCACCGCTGTGCCGTCAGG
GATTGCACGGCAATGGATTCCCGATCGTCCGATTGACGGATACGATAAAG
TTGCCGTCCTCAAGGTCTTCCTCAGCACGGAACT
FMO11622.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NFAT-RD | 5243 | CG11172-RD | 713..1638 | 9..931 | 4345 | 98.3 | Plus |
| NFAT-RG | 5781 | CG11172-RG | 713..1638 | 9..931 | 4345 | 98.3 | Plus |
| NFAT-RH | 5049 | CG11172-RH | 651..1444 | 141..931 | 3685 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13649654..13650067 | 266..679 | 2070 | 100 | Plus |
| X | 23542271 | X | 13654782..13655038 | 678..931 | 875 | 93.8 | Plus |
| X | 23542271 | X | 13625457..13625590 | 9..142 | 670 | 100 | Plus |
| X | 23542271 | X | 13649374..13649501 | 139..266 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:57:33 has no hits.
FMO11622.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:54 Download gff for
FMO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NFAT-RD | 701..1627 | 9..934 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:47 Download gff for
FMO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NFAT-RG | 713..1639 | 9..934 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:46 Download gff for
FMO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NFAT-RG | 713..1639 | 9..934 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:46 Download gff for
FMO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13625457..13625589 | 9..141 | 100 | -> | Plus |
| X | 13649377..13649501 | 142..266 | 100 | -> | Plus |
| X | 13649655..13650067 | 267..679 | 100 | -> | Plus |
| X | 13654784..13655039 | 680..934 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:47 Download gff for
FMO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13519490..13519622 | 9..141 | 100 | -> | Plus |
| arm_X | 13543410..13543534 | 142..266 | 100 | -> | Plus |
| arm_X | 13543688..13544100 | 267..679 | 100 | -> | Plus |
| arm_X | 13548817..13549072 | 680..934 | 93 | | Plus |
