Clone FMO11623 Report

Search the DGRC for FMO11623

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:23
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18249-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11623.5prime Sequence

995 bp (992 high quality bases) assembled on 2012-05-29

> FMO11623.5prime
CAGTCGACATGCATTTTTACAAGTACATTTTACTCGGTATTTGCGGCTTA
ACGGTAAGCGATGCACTTGCCGTGTACGATGCCTCCGGACGCTTTAATCT
CAGTGCCAGTTGCCCGGATTCCTTCTGCAGCTTAAGTGATCGGCCAGTGG
CATACTCTGCGACTCCGGCTCTTCAGCTCCGGGAATTGCACTTGAGAAAC
TGCAGCCGGCAATCGATCACATGGCTGGTTCTGCAACTTACACCTGGTCT
TCGCACCTTGGTTATCCGCAACTGTGCCACCTACCACATTAGCAAGGAGA
GTCTGAGGCCAGTGGAAAATCTAACCTCCCTGCAGATGCAGGGCACTAGT
CTTGGCGTCCTCCGGGATCAGATCTTTAATGCAGTGCCTCGTTTGGAGAT
CCTGCAGCTAAGTCAGAACTTCATCCACACGGTTCACGTAGCCGCCTTCC
AGGGCTTATCCAAACTAAGATTACTGGGTCTGCAAGGGAATGCGATAGCT
GAAATCCTGTCTAGCACACTTGATCCTCTGATGGAGCTAGTCCATCTGGA
CTTAAGCAGGAATGAGCTCACAACTTTGCCACAAAACATCTTTGCTAAAA
ATAAGAAGCTACAAACCCTGTTACTCAATGGCAACCCATTGAGAATTTTA
ATGCCAGATGTACTAGGCTCTCTACCCAATCTTCGACTGCTCGACTTGGG
ACATGCTGCTGAATTGGAGGTGATGACGCTAAACCTTACCAATGTGCAGA
ATTTAGTTCTGGAGGGGAGTAGTCTTAGCAGTTTAGTCATCAACGGAGGC
TTTATCAAACTGCAGGCGGGGAACAATGAGCTGAATCATCTGCAAGTGGG
AAACAAGAGCTCTGTGATTGAGATGGATTTGCATGTAATTTGTTGAATGG
AAATGATACGGCCGCCCTTCTCAGGGAATGTGGAATCTGCAAAGGCTGGA
TCTGTCCTAAAATAAGGATCGAACCTTTGCTCCAGCATGGAAAGC

FMO11623.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG18249-RC 2022 CG18249-RC 51..1037 7..992 4805 99.3 Plus
CG18249-RB 1983 CG18249-RB 51..1037 7..992 4805 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8220196..8221182 7..992 4730 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 02:57:36 has no hits.

FMO11623.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:55 Download gff for FMO11623.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18249-RC 51..1044 1..995 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:49 Download gff for FMO11623.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18249-RB 46..1039 1..995 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:48 Download gff for FMO11623.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18249-RB 46..1039 1..995 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:48 Download gff for FMO11623.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8220191..8221164 1..974 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:49 Download gff for FMO11623.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4045913..4046886 1..974 99 <- Plus