FMO11626.5prime Sequence
569 bp (569 high quality bases) assembled on 2012-05-29
> FMO11626.5prime
CAGTCGACATGGCGCCCAATTTGACTTGTGTATGGATTACTCTGCTGCAA
CTCATGAGCTTGGCTCTGGCCGATGTCTCACACCTGGATTACTCGATAGC
ACCCAGCACCCAGCTGGGTTACTATCACTATCCCGCTCCCAACAGGCCAG
CCGTGCAGCGGAGCCAGAGGAACCAGTACCAACAGAACCAGCAGTATCCC
CAAGTGGCACGACAGTTTGCCGAGCCCGCCTTGGAGCATGCCGCCTTCAC
CCAGGCTCTGACCAGCCAGGGTTACGTATTTGGAGCACCGTCGTCTGCCC
TCCAGGTGGCTCCCCCGGCACCACAGCCCCAGCAGGTGGCCAGAGTATCA
TCTGCTGCGGGATCGGCCACAGGTCGTTCCATATCCTCCGCTTCCGTGGA
TGCCAACTCGCTGAATCTCAAGCTGCCAGTGCCCTTTGGCATTGCTCCAC
TGAATGTGGCGCAACTTCCGCTGCAGGCTGGGGCACCATATGCCAGTGTG
CCCAGAACCACGGGGCTAACCTCCTATGGAACACCGCAGATCCAGAGGCG
CGCAAGCTTTCTAGACCAT
FMO11626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13046-RB | 781 | CG13046-RB | 101..643 | 9..551 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16287718..16288248 | 551..21 | 2655 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6892 | 156..203 | 105 | 68.8 | Plus |
FMO11626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:27 Download gff for
FMO11626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13046-RB | 1..546 | 9..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:18 Download gff for
FMO11626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13046-RB | 94..643 | 1..551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:39 Download gff for
FMO11626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13046-RB | 94..643 | 1..551 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:39 Download gff for
FMO11626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16287718..16288248 | 21..551 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:18 Download gff for
FMO11626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16280818..16281348 | 21..551 | 100 | <- | Minus |
