FMO11628.5prime Sequence
860 bp (857 high quality bases) assembled on 2012-05-29
> FMO11628.5prime
CAGTCGACATGAAGCTATTTGGACTGCTCTGCGTAATGTTAGTACTTCAA
GAAAGTACTCTGGCTGTTGTACAAAACGGATTTGCGTTCAAGACGTCCTT
ATGCGAGGGTAAAAATGGTGGACTCTTGCCCATGTTTGGATCCTGTAAAG
GATATTACGTGTGTGCTGATGGAAACGCTGTGACCGGAACTTGTGAAAAG
AATACGTTGTTTAATCCTTTAACGTTGCACTGCGATGATCCTGACAATGT
GGATTGCATTTTCGATGGCAAGGATAATATTGTTGACGACACGTCAAGTT
CTGAAAGCGACGAAGACGATGATGAGGAAATGGCCAAAACTGATCCTCCC
GTTACTGTCAAAGCGACGAAAAAGCCGCGTCCTACAACCCTTGACAAAAT
GTGTGCTGGCAAGAAGGATGGAGTGATGCTTACAAAGAACGGGTCCTGCC
AGGAATATTATGTCTGCAAAGCAAAAAAGCCCCATCTGCGCTCTTGTCCT
GACAAACAACATTTTAGTCCAACTCGTCGCATTTGCATGAAGGCCTCAGA
AGCCAAGTGTTCGGGTGGAACCCGAGAAAATAAAGAATCAGATGGTCCTG
CCACCACGGGAGGAGTGTGTTCAGATGAAAAGGAAAACTCTCTTGTTGCT
CATCGCAGCGATTGTGGCAAGTTTATGCTCTGCAGCAACATGATGTTTTT
GGTAATGGACTGCCCAACTGGCCTGCATTTCAATATATCCACATCACGAT
GCGATTTCCCAAAATTGCAAAATGCCAGACCAAGCTAAATGAAGAAATCC
AAGTCTAAGAAACCTGTGCGCAAGTCAAAAAAAAACGTCGATTCCAGCTT
TCTAGACCTT
FMO11628.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-G-RA | 962 | CG9781-RA | 25..861 | 9..844 | 4035 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11952411..11953176 | 833..71 | 3640 | 99 | Minus |
| 3L | 28110227 | 3L | 11953228..11953293 | 74..9 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:55:28 has no hits.
FMO11628.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:29 Download gff for
FMO11628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-G-RA | 1..840 | 9..847 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:23 Download gff for
FMO11628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-G-RA | 17..866 | 1..849 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:42 Download gff for
FMO11628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-G-RA | 17..866 | 1..849 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:42 Download gff for
FMO11628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11952397..11953172 | 75..849 | 98 | <- | Minus |
| 3L | 11953228..11953299 | 1..74 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:23 Download gff for
FMO11628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11945497..11946272 | 75..849 | 98 | <- | Minus |
| arm_3L | 11946328..11946399 | 1..74 | 94 | | Minus |
