FMO11629.5prime Sequence
1100 bp (991 high quality bases) assembled on 2012-05-29
> FMO11629.5prime
CAGTCGACATGGCCGAGAACGCGGGCTTCATCAGTGTGCCCTGGGGGCAG
CACAAGCTGGGCGCGATGTACAATACGCCGTTTCCCTCGATAAGCCGCCC
GAAGTGCATCGGTGTGTGCAGCATAAACGCTAGCCGGGAATTTGTGGACG
ACGCCAGCTGCGCCAGCTACTTGGCTGGCCAACCGTGGCCACCGCTGCCG
TTCGATCTTAACGGGGGTATAGAGGATGTGATCCGTAAGCCCGTCGAGAA
CGGCAAACGGGATCTGGAAATTATGCTGACCTACATTAAGCAACACCAGA
AGGAGCTGCTCCGTCAGAGTAGCTCCGATGCGAGAAATCTACGCCTGGAC
AGCGACTTTGTAACACTGCGCGGTATTTTGCGGCAGATAATGTGCCTGCA
GTATGATAATCGCTCATTCCGCGTCAAGGCGACGCTCCTGAACGGCAACG
TCTACATGTGCAAGGAGGAAACCCCAGAGCAGCAGCTGGAGAACGCGAAC
ATGAGCAGGGCACAGCGGGTCATGTGCTCCTGGGGCTTCAAGTTCGAGCA
GTACCTGACCAGTGCCCAGGCGCAGGGAAAACCGGTGACCAATGTGCCGG
TCAACGAGGCAGAGGAGTTCATGGGCGTGTACCGCACGAACCTGGCCGGG
ATTTTGATGCTATACGGCGCCGAACTGGACTGTGTGGACAGCAAGGAGCC
AGTTGACTTCAAAGATTGCAGAGTGCTCGACTCATTGAAATTCGTAGAGC
TAAAGACCAGCGTCTTCAATATGAACCCTCACCAAATTCGCACCTTTCAA
ATCGTTCAAGTCTGCCAACTGGTGGAGTCAGTCATTCCCTGGTGGGCATC
ACTACGCTCTACGTGGGACTCCGCGACACCAAAGGCATGCTTGCAGAGGA
TCGATGAGATCGATGTGGCAACACTGGCCCGCAACAAACCGTGAGTGCAT
CGGCAATGGCTTGTTCCTTGAACAGTTCTGCGCAATCTTTAAGAAGCTGC
TTGTGACATTTACGAATCCGTTTGCGGCGCCCAGTTGACTTTTTAAATAG
ACAGCCCAGACTACGAAGTGTTGGCCCGGTTCCGGTACTACACAATTCCT
FMO11629.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9125-RA | 1329 | CG9125-RA | 94..1155 | 9..1070 | 4860 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16802557..16803251 | 703..9 | 3475 | 100 | Minus |
X | 23542271 | X | 16802147..16802469 | 1027..704 | 1135 | 94.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:57:55 has no hits.
FMO11629.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:58 Download gff for
FMO11629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9125-RA | 1..1042 | 9..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:01 Download gff for
FMO11629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9125-RA | 88..1135 | 1..1049 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:57 Download gff for
FMO11629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9125-RA | 88..1135 | 1..1049 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:57 Download gff for
FMO11629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16802123..16802469 | 704..1049 | 94 | <- | Minus |
X | 16802557..16803256 | 1..703 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:01 Download gff for
FMO11629.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16696156..16696502 | 704..1049 | 94 | <- | Minus |
arm_X | 16696590..16697289 | 1..703 | 99 | | Minus |