Clone FMO11630 Report

Search the DGRC for FMO11630

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15047-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11630.5prime Sequence

548 bp (548 high quality bases) assembled on 2012-05-29

> FMO11630.5prime
CAGTCGACATGTCGCAAGTTGAGCAATTGCATCTGAAATCTCCGCCAGAA
ACGGCTGCAGCAGGAGCAGGATCTCCTCAAGCAGCCGCTTCGGTGGCCGT
GGCAGCCGATGCCAACGAAACGGAGCTCATGGTGAAGGTGGTCATGGACA
TGGGCTATCCGGAGGGCGAGGCTCGCTTGGCGCTGGCCCAGAGTAACAAC
AACGTGCAGCGGGCGGTGCAGATCTTGGTGGAGGGAATGGATGACGGCGA
GACGCGCAAAAGGCGTGGCAATCGCAAGCGATTAAGGCAACTGCGCAGCT
CCCTCATGGGGAATCCACTTGCCACGGATGAAGCCATCATCGAGATGATG
CGCGATCAGAGGATCGCACAGACGCTCGCCGAGTTGGTGAACGGCAGCAG
TGTGCAGGCCATGGAACTGCTACTGTCCGAGGAAGTGGATGAGTCCGAGA
ACGAGCAGCCGGAGGAGCAGGAGCTTGAAACCAGCCAGGAGCAGTCATCC
TCATCTGCCGATGACTCTTCGCCTAGCAACGCAAGCTTTCTAGACCAT

FMO11630.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15047-RA 911 CG15047-RA 30..551 9..530 2610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18528712..18529233 9..530 2610 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:57:59 has no hits.

FMO11630.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:59 Download gff for FMO11630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 16..551 1..535 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:04 Download gff for FMO11630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 22..557 1..535 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:59 Download gff for FMO11630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15047-RA 22..557 1..535 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:59 Download gff for FMO11630.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18528704..18529239 1..535 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:04 Download gff for FMO11630.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18422737..18423272 1..535 98   Plus