Clone FMO11632 Report

Search the DGRC for FMO11632

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:32
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13438-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11632.5prime Sequence

686 bp (686 high quality bases) assembled on 2012-05-29

> FMO11632.5prime
CAGTCGACATGAAGTCGTTCGGGAACTTGACCTTTGGCCTACTCGTCATC
CTTATAGCAAGCTTTACTGTCGGCCTAGAGGCTCGTCGCCTGGCTTTGCG
TCCATTGACAGGAAGGGAACTGAGAAGAGCTCTTAGGGAATCCGGATTCG
ATGAGGATTCTGCAGCTGGAAGATCAGTGGCGTCGGCGCTGTCCGGACTC
AGTGGATTCGCCCTGGGCATCACAAAGGGCATTGGTGGCTCACTGCTGTT
CGATGTGGTCACCTCGAATGTGACCATTGATTACATTACCAGTCTGCTGA
ACTCCACTGCCTCATCGTCGACTTCAAGCAGCAGTGGAACTGCACAGGAG
ATCTGTTTCAACAGTCGCAGTGCCGACGGTGAGGTGATTAACGGCAGGAG
TAATGGCTTCAATGACATGGATGATGGAGCAGATCTCGACGGCGAGTGGA
GACAGACTACCAGTGGCACGGGCACGGGCTCTGTTACTGGCACTGGCACT
GAGACAGGAACTACCACCTCCTCGTCTTCCAACGGCCTCACCTGCATTGT
CCTGAGCAAGGAGGGTTCCCGTCGCAGGCGCCAGTTGCGAATCCAACCAG
GAACGTTGAGATCTGTTTATCCTAAAAGCCATCGGCAGACCCTGAAAAAG
TACCGCCGGCATAGGGTTGCAAGCTTTCTAGACCAT

FMO11632.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13438-RA 834 CG13438-RA 42..701 9..668 3300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20693019..20693606 81..668 2940 100 Plus
2R 25286936 2R 20692870..20692942 9..81 365 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:58:03 has no hits.

FMO11632.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:59 Download gff for FMO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 1..663 9..669 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:07 Download gff for FMO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 42..708 9..677 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:02 Download gff for FMO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13438-RA 42..708 9..677 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:02 Download gff for FMO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20692870..20692942 9..81 100 -> Plus
2R 20693020..20693613 82..677 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:07 Download gff for FMO11632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16580375..16580447 9..81 100 -> Plus
arm_2R 16580525..16581118 82..677 99   Plus