FMO11633.5prime Sequence
805 bp (805 high quality bases) assembled on 2012-05-29
> FMO11633.5prime
CAGTCGACATGTCGAAAAAGTATCCGAACCCGGTGACCAAGCACTTCGTC
TATAGCGAAAGGACGCGAAAAAGTACCTGCAAAAGGTGCCACTTCGATAT
GGCAGGTCGCCACTCCGAGAATCTGATGCGGCATTTGAAACGTAAGCATG
AGGATGCCTACAAAAGTGTTCTGGACGAGAAGCGAGAAATCCGTGCGGCA
CTTGCCCAGCAGCAGGCCAACAAAGATGCAGTCAATCCGACGAAGAAAGT
CTTGGCCTCTAAGTATCCTCTATATCCAACGACACGAAAGCAGTCTTTCA
TTACCGAGGACGACGACTCCCAGCACAGTGGCATGGAAACCATGGTGACG
TTGAATGGTGAAGAGACCGGGGACGTAGATAACAAGAACAACGCTACAGT
CAGTCAGTTCGAGGGCGTTTTTATTGGAAAATCGGAGATACCTGACGAGG
AGTATCAGTGGAAAAACTCTGCAAATATGGAACTGAAGGCCGTCGATGTT
TCTGTGGCCCAGACTACTAACGAATCCAGCGTCTGTGTGGCTCCCACTTC
CACCACTGCTCGTGCCAAGTCTCCAGCTCGAGCCGCATCTTCTGCGGCTG
CTTTAGACCAATCTCCAAGCGACGAGGACTACTTCCTCCGCTATCTGGGC
AGCAAATTAGGCAAATACTCTGCTCGCACAAGGAACACAGTCCAGTTTCA
CATTAATCGCATACTGTACAAGGCGGACATGGGTCACTTTGAGGAAACAG
ATTCCAGGATGGGCGATGACGACTACGCCCTCCCCGGCAAGCTTTTCTAG
ACCAT
FMO11633.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14050-RB | 1385 | CG14050-RB | 528..1304 | 9..786 | 3850 | 99.7 | Plus |
| CG14050-RA | 952 | CG14050-RA | 95..871 | 9..786 | 3850 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2324835..2325307 | 779..307 | 2350 | 99.8 | Minus |
| X | 23542271 | X | 2325390..2325690 | 309..9 | 1505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:58:06 has no hits.
FMO11633.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:00 Download gff for
FMO11633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 1..780 | 9..787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:10 Download gff for
FMO11633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 95..875 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:03 Download gff for
FMO11633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14050-RA | 95..875 | 9..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:03 Download gff for
FMO11633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2324825..2325305 | 309..792 | 98 | <- | Minus |
| X | 2325391..2325690 | 9..308 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:10 Download gff for
FMO11633.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2218858..2219338 | 309..792 | 98 | <- | Minus |
| arm_X | 2219424..2219723 | 9..308 | 100 | | Minus |
