Clone FMO11634 Report

Search the DGRC for FMO11634

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:34
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13226-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11634.5prime Sequence

710 bp (-60 high quality bases) assembled on 2012-05-21

> FMO11634.5prime
TTTCGCTAAAACCTTCTCTTCCTGATGGTCTCCGGTCAGAGGAGTAAGTC
CCGGAGTGAACGTCCTCAAGGCAGGACCTTGCGATTATTGACTCCCCTTT
TACTGGGAGGTGGTGGACCGCTCTTCGATGTTCCCCTGCCCGCAGGACCA
CCCATCAGACCAGGTGGTGGTTCATCCTCCGCAGCCGGAGGAGGCACCCA
ATCGGACTCATACTACGGCGGCAGTTATCCTAGCTACGGATACAGGCCCA
ACTATGGATACGGATATCCCAACTACGGTTATAACTATGGATACCCGGTC
TTCGGCTACGGCTATGGGCAGAACTACTACAGACCCAGCTACTACTATTA
TGGTGGATACCAGAGACCGCAGCCCTATTATGGTTACCGGCCCACTTATA
GCTCCAGTGGAACTGCCGGATCAGGCGGTTATCCCTCATACAGCAGTTCA
GCTGTCATCTCAAGCTCTCCAACAAATTCGGCCGTTGGTTCGGCATCAGG
AGCAGGAGCAGTATCCGGAGGTGGAACCCCACAGCTATCCACCGCTCAGC
AAGCCCAGTTAGCCGGTCTTTTGGGTCAGGCCCCTTGGCAGCAGTCTACG
CCCTCTTCTCGCCCAATGGGGGCGGGGCAGCTGGAGCGACAGGAGCGGGA
GCAAATCCACAAGCGCTGAGCGGTCTACTCAGTCTGCTTGGCGCAAGCTT
TCTAGACCAT

FMO11634.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13226-RA 953 CG13226-RA 76..754 12..692 3325 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11244322..11245000 12..692 3275 99.4 Plus
Blast to na_te.dros performed on 2014-11-28 02:52:33 has no hits.

FMO11634.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-21 12:21:49 Download gff for FMO11634.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13226-RA 24..714 1..693 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:37 Download gff for FMO11634.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13226-RA 60..747 1..692 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:22 Download gff for FMO11634.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13226-RA 67..754 1..692 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:22 Download gff for FMO11634.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11244313..11245000 1..692 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:37 Download gff for FMO11634.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7131818..7132505 1..692 98   Plus