Clone FMO11635 Report

Search the DGRC for FMO11635

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:35
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13258-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11635.5prime Sequence

638 bp (638 high quality bases) assembled on 2012-05-29

> FMO11635.5prime
CAGTCGACATGGGTTTCAGAATTGTGCTCTTAGCTGCCACCGGTCTGGGC
GCCATGTACATGATGCATCTGCTCGCCCAGGATTGGGTGAAGATCCGACC
CATTCGCGGAATAACCCAACTAGCCGGAATGGCCGCTCAGCCGATCCAAC
AGGTTATTGCACCCATTCAACAGGCCAGCGGGGCTCTTAATTTATTCCGG
AGCAGGAGAGAGGCCAGCCTGAATCACGAACTCGGTTGGGTGCGAAGGAC
CCAAGATTCGGGTGGGGGCAATGGTGCCAGAGGTGGGGGCGCGGATCACA
GGCCACCACCTGCCGTCGATTGGAAGAGGATCCTGTCGAGAGATCCCTTC
GAGTGCCTGCAATCGTTGATATGCCAACTGATGTCCGGAGCGGAAGCGAA
AGTTCCAGAGGCTGAGTTGCTCATGGATTATCTGGAGTCATCGCTGGAGC
TGGCACCGGCCAAAATTGGTCGCGCCTTCAGTCGAGGATTGGCCTTGAGA
GGCAGCACGGAGCTGTGCTACAACGAATATCCATTTTGCCTCTACTCCGC
CAAAACGATGTTGCGCATCCTGCGTTGGTTCAGTGAATCGGGCGAATCGT
TGCCCGTGGATAATGTGGCCGCAAGCTTTCTAGACCAT

FMO11635.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13258-RA 786 CG13258-RA 55..666 9..620 3060 100 Plus
CG13258-RB 811 CG13258-RB 89..691 18..620 3015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16292130..16292732 620..18 3015 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:55:12 has no hits.

FMO11635.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:26 Download gff for FMO11635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13258-RA 1..615 9..621 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:14 Download gff for FMO11635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13258-RA 55..671 9..628 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:36 Download gff for FMO11635.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13258-RA 55..671 9..628 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:36 Download gff for FMO11635.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16292125..16292732 18..628 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:14 Download gff for FMO11635.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16292125..16292732 18..628 99   Minus