Clone FMO11637 Report

Search the DGRC for FMO11637

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13841-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11637.5prime Sequence

386 bp (386 high quality bases) assembled on 2012-05-29

> FMO11637.5prime
CAGTCGACATGATCAGAGTTACTACGTGCCTGTTGATGTTCGTATTCTTT
GTTTTGTACATCCATCAAAATCATGCCGACACCAAAGTGCTTTACGAATT
TCACATCAGGGAAGCCAACCAGCAGCGCGATGAAATGGGAGAGTTCAAGG
ATACGTCCGAGGAATCTGACGAGGAACCCGAACTGATCATCACGGGCAAA
CGAACCTCTTCGTACGTTTTTCCCGCCAAGGATAACAACTATGTGTACGT
GGAAACGGCCACCTATGTGGCGGATAACAATGGCTATCATGTCAAGTACA
ACATCACCTTGGATACCGTGGAGCTTGACCGTCGCCTCAGCGGACAAGCA
CTTAAGACCACCGCTGGTGCAAGCTTTCTAGACCAT

FMO11637.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13841-RB 541 CG13841-RB 35..394 9..368 1800 100 Plus
CG13841-RA 835 CG13841-RA 35..394 9..368 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22767173..22767437 368..104 1325 100 Minus
3R 32079331 3R 22767505..22767582 103..26 390 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:58:13 has no hits.

FMO11637.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:01 Download gff for FMO11637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13841-RA 28..399 1..374 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:14 Download gff for FMO11637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13841-RA 28..399 1..374 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:07 Download gff for FMO11637.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13841-RA 28..399 1..374 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:07 Download gff for FMO11637.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22767168..22767437 104..374 98 <- Minus
3R 22767505..22767581 27..103 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:14 Download gff for FMO11637.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18592890..18593159 104..374 98 <- Minus
arm_3R 18593227..18593303 27..103 100 <- Minus