FMO11638.5prime Sequence
1101 bp (935 high quality bases) assembled on 2012-05-21
> FMO11638.5prime
TTTAATAGCGGATGAGGTGGATGCCCCAGCTTGGCTAAATGCGGAACTTA
TCGAGGGCGCTCTAAGAGCTTATGAAAAGGATCCTGAATTGCATGTAACT
GATTTGAAAATTAGTCCTGCGACTCTGCAGGGAGATCATTATGCCAGCGT
CATGTTCCGAGCTGTTTCCCACTACTCCACCGCCAAGGGGAATTTCTCCA
AGGCACTGATAGTTAAAACAATGCCGGAACAGGAAGGTCACAAAAAGGAT
ATGCTGTCAAATTCGCCGATATTCAAAACGGAGATCTTAATGTACAGCAA
AGCTCTTCCAGAGCTCGAGAGAATTCTCCGGGAGGCAGGGGTTACTACCA
AGCTCTATGCGCCTTGTATCTATCACAGCTTGGAACCTCATCAGGTGATG
ATATTCTAGGATCTGGTGCCACAGGGGTACACCGTCATCCGAGATCGTTA
TCCTAATAAAGAAGAACTTCAGAAAGCCTTCTTCAAGTTGGCAAAGTGGC
ATGCAGCCAGCATGAAAGTTTTAAATGAGCGACCTGACTTTCTTAAGGAA
TTTAAGTATGGGTTATGGGGCATGCCCAACTTTTCTGAACGATTCTATAG
TGACAACTGGAGTACCCTGTTTCCTGGAAATGTTAGACAAGGTTCCGGAA
CTCACGAAATATAAGCCGTATTTCGAAAAAATAAAAGGATAACTACATTC
AGCAGATGAGTGCAGTCATGGAAGAATATCGCACTAATCCCGAAGCCAAA
TAGGTACTACGTGCTGTGTCACGGGGATTTTCATGGGCGCAACATGATGT
TTAGGTATAACAAAGAAACAGGGTCCTTTTCGAGGACGTAATGCTGGTGG
ATTTCCAGATCAGTAATTGTTTGCCCCCTTTCCATGACCTAAATTTACTC
CATCTTCATGGTAATGGATACGGAGGATCGTTGGGATCTTGTAAGGAATA
TAATCATTATTATTTCTCTGTTCTGGCGACACTCTGAAAAAAATAAGCTT
CCAAGGTGAAATGCCAACTCCAAACGGATGTGGGAGCATAATCCATGGGC
CATAAGAATTACGATTCCTCATGATGACCAGCTTTTCTACCCCTGGTGCC
T
FMO11638.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13658-RB | 1334 | CG13658-RB | 39..1130 | 1..1098 | 4885 | 97.3 | Plus |
CG31104-RA | 1382 | CG31104-RA | 208..646 | 128..566 | 575 | 76 | Plus |
CG11893-RA | 1415 | CG11893-RA | 66..862 | 1..801 | 560 | 72.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25287518..25288039 | 8..529 | 2580 | 99.6 | Plus |
3R | 32079331 | 3R | 25288096..25288584 | 528..1020 | 1930 | 96 | Plus |
3R | 32079331 | 3R | 25285680..25285997 | 128..445 | 525 | 77.7 | Plus |
3R | 32079331 | 3R | 25289963..25290750 | 11..801 | 370 | 70.7 | Plus |
3R | 32079331 | 3R | 25283844..25284164 | 128..448 | 270 | 72.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:52:37 has no hits.
FMO11638.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-21 12:21:56 Download gff for
FMO11638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13658-RB | 39..1133 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:39 Download gff for
FMO11638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13658-RB | 39..1133 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:23 Download gff for
FMO11638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13658-RB | 39..1133 | 1..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:23 Download gff for
FMO11638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25287512..25288039 | 1..529 | 99 | -> | Plus |
3R | 25288098..25288626 | 530..1063 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:39 Download gff for
FMO11638.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21113234..21113761 | 1..529 | 99 | -> | Plus |
arm_3R | 21113820..21114348 | 530..1063 | 95 | -> | Plus |