FMO11639.5prime Sequence
1078 bp (941 high quality bases) assembled on 2012-05-29
> FMO11639.5prime
CAGTCGACATGAGCGAGCCCAGTGAATCCGGCGATCCCAAGCCTCACAAG
ACTGCCGAGCACCAAATTGGGGATCCTCCCCAAAAAGAGGCGGCAGCTGA
TTTCGAGGCAGCCATCGATGCCGCTGGCTTTGGAATGTTCAACATCCTCC
TGCTGGTGGCCGCCGTGCCAGCGGCCATGGGCACCGTCTACGAGACCTCC
ACGATGTCCTACATCCTGCCCAGCGCCGAGTGTGATCTTAAGCTGAGCCT
CCTGGACAAGGGCATCCTGAATGCCATTACCTATGCGGGCATGATCAGTT
CGGCGGTGCTTTGGGGCTACTTGGCCGACATCAAGGGCAGAAGAAACCTC
CTGATTGTGGGCTATGCCGCCGATACGATATGCGTTTTGGGCGGAGCACT
CAGTCAAAGTAGGATCCAACTGATGGTTTTTAAATACCTTGGAGGCTTTT
GTATGAGTGGCCCCTTTGCCGTTCTTATGACCTATTTGACGGAACTCCAT
GGACGGAAGCATCGACAGCGTATCATGATGATGGTGGGCATCATGTTCTC
AATTGCAACGCTAACGCTACCGGGACTGGCCATGCTGATATTGCCCGAGA
CGTGGAACATTCAGATCTGGACTTTGTCGTTAACATCCTGGCAGTTTTTC
GTCGCCGTCACCGCACTTCCCAGTCTTCTGAGCTTTGTGCTTTTCTTTTT
CTTTCCCGGAGAGTCCCAAGTTTCTCATGTCCAAAGGGCGCAACCGGGAA
GCCCTGGATGCCTTCAAGTTTCATGTATCACCTGAACCTCGAGAAAACCC
AAGGACTCGTTTTCCAATCAATTGCTGGCCAATGAATTTAATTGTTTCCG
GTAAAAAGCACGCGAAGGATGAACAATCCCGACTGAGCTTAAACTTCCGA
CGGAGTGCGTCGAATTCAGGATCAGAAAATCAGGACTCGAAAGAGCTCCC
TGCGTTCGGCTTCCCGCAGCTTCGTCCCCTTTTCCACAAACCTACTTGGG
CTTATCCCTTTGGGTGTATCTCCTCACTTTTGCGTGTCCTGGGACAAATC
ACTTGGCGAATTGTGGCTGCCCCAATGG
FMO11639.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3690-RB | 2540 | CG3690-RB | 19..1089 | 9..1075 | 4725 | 96.9 | Plus |
CG3690-RA | 2073 | CG3690-RA | 19..1089 | 9..1075 | 4725 | 96.9 | Plus |
CG14691-RC | 1675 | CG14691-RC | 230..329 | 217..316 | 245 | 83 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 951440..951882 | 451..9 | 2215 | 100 | Minus |
X | 23542271 | X | 951197..951376 | 630..451 | 900 | 100 | Minus |
X | 23542271 | X | 950661..950837 | 812..633 | 735 | 97.8 | Minus |
X | 23542271 | X | 950372..950595 | 1036..820 | 545 | 91.1 | Minus |
3R | 32079331 | 3R | 10755306..10755405 | 316..217 | 245 | 83 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:58:16 has no hits.
FMO11639.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:02 Download gff for
FMO11639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3690-RA | 1..1074 | 9..1078 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:16 Download gff for
FMO11639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3690-RA | 8..1092 | 1..1078 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:09 Download gff for
FMO11639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3690-RA | 8..1092 | 1..1078 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:09 Download gff for
FMO11639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 950364..950599 | 817..1043 | 91 | <- | Minus |
X | 950658..950839 | 631..816 | 96 | <- | Minus |
X | 951197..951375 | 452..630 | 100 | <- | Minus |
X | 951440..951886 | 1..451 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:16 Download gff for
FMO11639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 844397..844632 | 817..1043 | 91 | <- | Minus |
arm_X | 844691..844872 | 631..816 | 96 | <- | Minus |
arm_X | 845230..845408 | 452..630 | 100 | <- | Minus |
arm_X | 845473..845919 | 1..451 | 99 | | Minus |