FMO11641.5prime Sequence
476 bp (476 high quality bases) assembled on 2012-05-29
> FMO11641.5prime
CAGTCGACATGAGCCACTTCGACTATCTGTTTAAGGTTCTCGTCCTGGGT
GACAGCGGCGTGGGCAAATCCTGCCTGCTAATGCGTTTCTCGGATGACCG
ATTCACCGAGAAATACCTGAGAACGATGGGCATAGATGTCAAGGCGCGCA
GCGTGGAGCTGGTCAGTCGGGTGATGATGCTGCAGGTCTGGGATACCTCC
GGCGACAAGCGCTTCAATTCGCTGATGCCGTCCAATTATCGCAGTGCCCA
TGGCATACTGCTCGTCTACGACATAACGTCGTCCAAAAGTTTCCAAAACA
TCGATGGCTGGATGAAGGAGATACGGCGCATGTGTCCGGATAAGGTAACC
GTCCTGCTGGTGGGCAACAAAAGTGATGATCCGAACCATCGCCAGGTGAG
CATGGAGCAGGGGTTCAACTATGCCCATCGTGGGGCACTCGTCTTTGAAG
AGGTTTCCGCCAAGAGTGGAATGAAT
FMO11641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RabX2-RA | 791 | CG2885-RA | 68..535 | 9..476 | 2325 | 99.8 | Plus |
| Rab9Db-RA | 871 | CG9807-RA | 68..541 | 9..476 | 1435 | 87.1 | Plus |
| Rab9Fb-RA | 878 | CG32670-RA | 68..528 | 9..469 | 1435 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10417496..10417963 | 9..476 | 2325 | 99.8 | Plus |
| X | 23542271 | X | 10951959..10952419 | 469..9 | 1435 | 87.4 | Minus |
| X | 23542271 | X | 10622685..10623158 | 476..9 | 1405 | 86.9 | Minus |
| X | 23542271 | X | 10661285..10661758 | 476..9 | 1360 | 86.3 | Minus |
| X | 23542271 | X | 10950490..10950963 | 476..9 | 1360 | 86.3 | Minus |
| X | 23542271 | X | 10589182..10589655 | 9..476 | 1345 | 86.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:24 has no hits.
FMO11641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:03 Download gff for
FMO11641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RabX2-RA | 2..479 | 1..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:21 Download gff for
FMO11641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RabX2-RA | 58..535 | 1..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:12 Download gff for
FMO11641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RabX2-RA | 58..535 | 1..476 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:12 Download gff for
FMO11641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10417486..10417963 | 1..476 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:21 Download gff for
FMO11641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10311519..10311996 | 1..476 | 98 | | Plus |
