FMO11644.5prime Sequence
926 bp (924 high quality bases) assembled on 2012-05-29
> FMO11644.5prime
CAGTCGACATGACTATGACTTCTACGGTGCTCCAACGGCCCATTCAAGCC
AAGCCAGAGAAGAAGGCCTCCTCCAAATCGACCAGCTCCTCGAGAAGCCG
CTCCACGATGGCCTGGTCCAATGAGAAGCTGCGCTTCTCCTGCATCGACA
ACATCGGACTCAAGCAGCTATGGAAGCTGATTGCCCTGGACACGAGTGCT
TCATCCAAGCAGCGCAGTGCCATGATGTTGGAAGTGGAGCAACAGCAGCA
ACAGCAGCAGCAGCAGCAATCGAACAACAATAACGAGCGGATACCCAACG
AGAACTGCGACTATTTGAGTCTACAGAGATCGGGCCAGGCGCCGAAGAAT
CACATCCAGGCGCAGGATCCGGCTCAGATGTCCCTGCTCAAGTTCTTGGC
CATTAATGCCCTAGAGCTGAGTGCCCCAGCAACGCCACATCTCCTCCAGC
ATCAGCAGGCCCACAAGCAGGCGAAGCCACAGGGCTGGATGCAGCTATCC
GGTCACCCAGAGAGCATTGTTCCCACATCGACTGGAATAGTTCGCAAACG
GATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACTGATCTGCA
AGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAG
ATGCAATCACAGCACTTTATTGAGCTGCAGGATCTGCTGGCTGGCTTTCG
GGATCCGTGTGTGATGGACATCAAGATGGGCAGCCGCACCTTTCTCGAAT
CGGAGGTCAGCAATGCCACGCTCAGACCGGGACCTCTACCAGAAGATGAT
CGCCGTGGGATGCGGGAGCTCCCACGCCTGCGGAGCACGAGGCATGAGCG
ATCACCAGGCTGCGGTTACATGACATTCCGGGAGTCCCTGTCCTCCTCCA
CTCCAAGGGTTTCGGATCTAACACTG
FMO11644.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K1-RA | 2055 | CG4026-RA | 402..1319 | 9..926 | 4395 | 98.9 | Plus |
| IP3K1-RB | 1417 | CG4026-RB | 42..681 | 287..926 | 3005 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9787350..9787748 | 513..913 | 1765 | 98.3 | Plus |
| 2L | 23513712 | 2L | 9782785..9783063 | 9..287 | 1395 | 100 | Plus |
| 2L | 23513712 | 2L | 9786684..9786802 | 286..404 | 595 | 100 | Plus |
| 2L | 23513712 | 2L | 9787150..9787259 | 405..514 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:31 has no hits.
FMO11644.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:05 Download gff for
FMO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 388..1313 | 1..926 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:24 Download gff for
FMO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 394..1319 | 1..926 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:17 Download gff for
FMO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 394..1319 | 1..926 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:17 Download gff for
FMO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9782777..9783063 | 1..287 | 98 | -> | Plus |
| 2L | 9786686..9786802 | 288..404 | 100 | -> | Plus |
| 2L | 9787150..9787259 | 405..514 | 100 | -> | Plus |
| 2L | 9787352..9787763 | 515..926 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:24 Download gff for
FMO11644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9787150..9787259 | 405..514 | 100 | -> | Plus |
| arm_2L | 9786686..9786802 | 288..404 | 100 | -> | Plus |
| arm_2L | 9782777..9783063 | 1..287 | 98 | -> | Plus |
| arm_2L | 9787352..9787763 | 515..926 | 97 | | Plus |
