Clone FMO11645 Report

Search the DGRC for FMO11645

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:45
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15387-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11645.5prime Sequence

326 bp (326 high quality bases) assembled on 2012-05-29

> FMO11645.5prime
CAGTCGACATGGACATAATACGCTGTGTAAATCAGCCGGAAAACTCGAAG
AAACTCTCAGAGGCAAAGGCTTCCGCTGGAAAAGAGATGATTCTCATGAT
GCAGCACGTTTTTCCATTGGTGATGCAACTCCAACTGGAGGTCATTAAGG
GTCATGGGTTTCCTGGAAACCGCGAGGGATTAGTCCAGTTCTCCCAGCTC
ATCAGAGAAATGGAAAGGGACGACATGGAAATCGTACGCCTGCGCAGTCA
GATCCGCGCCATATACCTGCCCCCCATAGCTATAAACACCACCAACGACA
TCCTAATCGCAAGCTTTCTAGACCAT

FMO11645.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15387-RB 693 CG15387-RB 138..437 9..308 1500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2225801..2226005 308..104 1010 99.5 Minus
2L 23513712 2L 2226057..2226157 109..9 505 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:55:45 has no hits.

FMO11645.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:32 Download gff for FMO11645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15387-RA 384..692 4..314 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:36 Download gff for FMO11645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15387-RB 134..442 4..314 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:50 Download gff for FMO11645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15387-RB 134..442 4..314 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:50 Download gff for FMO11645.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2225796..2226001 108..314 99 <- Minus
2L 2226059..2226161 4..107 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:36 Download gff for FMO11645.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2225796..2226001 108..314 99 <- Minus
arm_2L 2226059..2226161 4..107 97   Minus