FMO11647.5prime Sequence
716 bp (716 high quality bases) assembled on 2012-05-29
> FMO11647.5prime
CAGTCGACATGATGAACGCCGTGTCGCGTGCTTACGTCAGAGGCGGAGCC
CAGGTCCTCTCCACGGGATTGAAGGCGAGCGGCGTGGCCGTCAACTCGAT
GGCCAATCGCCAGGCACACACCGACCTGCAGGTGCCAGACTTCTCGGCAT
ACCGCCGGGAGTCCGTGAAGGACAGTCGTCGTCGCAACGACACCGCCGAG
GAGCGCAAGGCCTTCTCCTACTTGATGGTCGGCGCCGGAGCCGTGGGCGG
TGCCTATGCGGCCAAGGGCCTGGTTAACACCTTCATCGGATCGATGAGCG
CCTCCGCCGAAGTGCTGGCCATGGCCAAGATCGAGATCAAGCTGTCCGAC
ATCCCGGAGGGCAAGTCGGTTACTTTCAAGTGGCGCGGAAAGCCCCTGTT
CATCCGCCACCGCACGGCCGCGGAAATCGAGACCGAGCGAAATGTGCCCA
CATCCACGCTGCGCGATCCGGAGGCTGATGATCAACGTGTGATCAAGCCC
GAGTGGCTGGTGGTCATCGGAGTGTGCACGCATCTGGGCTGTGTGCCCAT
CGCGAACGCCGGCGACTGGGGTGGCTACTACTGCCCCTGCCACGGCTCCC
ACTACGACGCCTCCGGAAGGATCCGCAAGGGACCCGCGCCCCTCAACTTG
GAGGTGCCCACCCACGAGTTCCCCAACGAGGGTCTTCTCGTGGTCGGCGC
AAGCTTTCTAGACCAT
FMO11647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RFeSP-RE | 1000 | CG7361-RE | 85..774 | 9..698 | 3450 | 100 | Plus |
RFeSP-RD | 1118 | CG7361-RD | 85..774 | 9..698 | 3450 | 100 | Plus |
RFeSP-RB | 851 | CG7361-RB | 85..774 | 9..698 | 3450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1613044..1613424 | 482..102 | 1905 | 100 | Minus |
2L | 23513712 | 2L | 1612773..1612988 | 698..483 | 1080 | 100 | Minus |
2L | 23513712 | 2L | 1613983..1614076 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:55:35 has no hits.
FMO11647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:30 Download gff for
FMO11647.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RFeSP-RB | 99..796 | 1..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:27 Download gff for
FMO11647.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RFeSP-RB | 77..774 | 1..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:45 Download gff for
FMO11647.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RFeSP-RB | 77..774 | 1..698 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:45 Download gff for
FMO11647.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1612773..1612988 | 483..698 | 100 | <- | Minus |
2L | 1613044..1613423 | 103..482 | 100 | <- | Minus |
2L | 1613983..1614084 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:27 Download gff for
FMO11647.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1613983..1614084 | 1..102 | 96 | | Minus |
arm_2L | 1612773..1612988 | 483..698 | 100 | <- | Minus |
arm_2L | 1613044..1613423 | 103..482 | 100 | <- | Minus |