FMO11648.5prime Sequence
347 bp (347 high quality bases) assembled on 2012-05-29
> FMO11648.5prime
CAGTCGACATGAAGAGCGACGAGATCATCGAGAAGATACGCAACAAGTTG
AAGGAATCGGATCCTGCCCGGCGCACCGTCGTCAACACGTTTCAGTTCAA
CTTCACCGATGCGGATGGTAATCTCATCAAGAGCATGGCGTTGGACATCT
ACGAGGGGAGTGCCACCAGTGTCGATGCACAGGTCACCATTTCCGATGAG
GACTTCTACTTGGTGGGCACTAAGCAGAAGACTTTCCAGGAGGTGTTGCA
GCAGGAGAAGGCTAAGATCGATGGCGATGAGGAGGCTATCAACAAAATGC
TGGAGAAGTTTCGCATAAATTCTCAAAACGCAAGCTTTCTAGACCAT
FMO11648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12269-RA | 462 | CG12269-RA | 35..357 | 7..329 | 1615 | 100 | Plus |
CG12269-RB | 477 | CG12269-RB | 35..372 | 7..329 | 1455 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18978378..18978569 | 329..138 | 960 | 100 | Minus |
3R | 32079331 | 3R | 18978644..18978775 | 138..7 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:55:38 has no hits.
FMO11648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:31 Download gff for
FMO11648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12269-RA | 27..362 | 1..336 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:29 Download gff for
FMO11648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12269-RA | 27..362 | 1..336 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:47 Download gff for
FMO11648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12269-RA | 27..362 | 1..336 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:47 Download gff for
FMO11648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18978644..18978777 | 1..138 | 97 | | Minus |
3R | 18978373..18978568 | 139..336 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:29 Download gff for
FMO11648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14804095..14804290 | 139..336 | 98 | <- | Minus |
arm_3R | 14804366..14804499 | 1..138 | 97 | | Minus |