FMO11649.5prime Sequence
452 bp (452 high quality bases) assembled on 2012-05-29
> FMO11649.5prime
CAGTCGACATGAAGGCCACTACTATTCTAGCCGTTGTTTCCGTGCTCACC
GCTTGTCTTTTGAGGAGCAGCGAGGCGGTGACCTGCACCGCCGATGCCAC
TGTCACAGGATGCATTGACTGCACCACCAATCCAACCGATTCCGAGTGCG
TGGCCGAGGCAGCCGCCGATACAACCAGTACAACTGTAGCAACGCCCACC
ACCACCGCCACCACAACATCAGCGACGGCGACCACCACTGCGGCCTCCAG
CACAAACACTTCCTCCGGACGGCGAAAGATCGTGCGCATCACCAATCTGC
GCTACACCAACGTTCGGCGCATCCGCGTCAACCGGAATGGATCGGGGAGC
ACCACCGTCCGGAATCGGAGGCGCAGGAACAACTCCAGACGTGTCAACGT
GAGGCGGGCCAATGGAAACGTTATTGTTGTCGGCGCAAGCTTTCTAGACC
AT
FMO11649.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8087-RA | 483 | CG8087-RA | 24..449 | 9..434 | 2130 | 100 | Plus |
CG14851-RA | 506 | CG14851-RA | 74..198 | 60..184 | 445 | 90.4 | Plus |
CG14850-RA | 587 | CG14850-RA | 92..202 | 50..160 | 360 | 88.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14564357..14564782 | 434..9 | 2130 | 100 | Minus |
3R | 32079331 | 3R | 14562413..14562537 | 60..184 | 445 | 90.4 | Plus |
3R | 32079331 | 3R | 14561026..14561136 | 50..160 | 360 | 88.3 | Plus |
Blast to na_te.dros performed 2014-11-28 02:55:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2388..2503 | 160..269 | 108 | 56.9 | Plus |
FMO11649.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:34 Download gff for
FMO11649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8087-RA | 1..430 | 9..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:43 Download gff for
FMO11649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8087-RA | 15..453 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:58 Download gff for
FMO11649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8087-RA | 15..453 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:58 Download gff for
FMO11649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14564353..14564790 | 1..439 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:43 Download gff for
FMO11649.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10390075..10390512 | 1..439 | 98 | | Minus |