Clone FMO11652 Report

Search the DGRC for FMO11652

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:52
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG4186-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11652.5prime Sequence

281 bp (281 high quality bases) assembled on 2012-05-29

> FMO11652.5prime
CAGTCGACATGCCTCGCAATCAAAACGCAGAGCAGGATAATCCCTGCCTA
AAGGAACAGGAGCTTTCATTTAAATGCCTCAACAAAAACAACTTTGATCG
CGACAAGTGCGAAATATATTTTGCCAATTATAACAATTGCAAGGAGTTCT
GGAACAAAGTAAAAACCGAAAGGAGAGCCAAGGGAATAGCTCCTTATTTG
CCGCCCTTAGAAGAACGCGATGGGATTAAAGCAGAATATATGAAAGGAAA
ACCCCAACAAAGCGTAAGCTTTCTAGACCAT

FMO11652.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4186-RB 444 CG4186-RB 56..310 9..263 1275 100 Plus
CG4186-RA 386 CG4186-RA 56..310 9..263 1275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20769893..20770004 152..263 560 100 Plus
3L 28110227 3L 20769737..20769837 52..152 505 100 Plus
3L 28110227 3L 20769641..20769686 9..54 230 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:58:34 has no hits.

FMO11652.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:05 Download gff for FMO11652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4186-RA 56..310 9..263 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:25 Download gff for FMO11652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4186-RA 56..310 9..263 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:18 Download gff for FMO11652.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4186-RA 56..310 9..263 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:18 Download gff for FMO11652.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20769641..20769685 9..53 100 -> Plus
3L 20769739..20769837 54..152 100 -> Plus
3L 20769894..20770004 153..263 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:25 Download gff for FMO11652.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20762741..20762785 9..53 100 -> Plus
arm_3L 20762839..20762937 54..152 100 -> Plus
arm_3L 20762994..20763104 153..263 100   Plus