Clone FMO11653 Report

Search the DGRC for FMO11653

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:53
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33474-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11653.5prime Sequence

630 bp (630 high quality bases) assembled on 2012-05-29

> FMO11653.5prime
CAGTCGACATGGCAAAGTTTATAAATGAGATCGGTGAACTTCTTGATTCC
TGTAGAGCCCGAGAGGTTTTGATGGAGGTATTATGCCAAAGTGCCCAATT
GGTAATAGGATACCAAATCAATCAGAGTCCAGACCTAAACAATGTGGGTT
CAGAAGACTCTGGGGAGCCACCTGTGCTTCGGTACACTGTGGACAGCGAA
CTGCACGACTATGAACCAGATCGCATTACGGCTCTATTGACGGTGATGTC
AAATACGGTGGATCTGCTTTTCTATCCCGTAGACACCATTTGCTGGCTGG
CCAGTCACAAAGTTTTCGATGTCAAAAAACAGAAGACCTGGCGCTTTGTG
AACTCGTTACTCAGCATGGTCTCTGCATACCTAAACGTCGTGAGAATTTC
AAGAATTTTCTTACAAGATGGCTATAAACTAAGTCACTTCTATGTTGTGT
CCCTTGCACACTTTTTATTCGATCTGCTTCACAACATCTGCAGTTTACCA
AGGAGTTACCTGTGGGGCATGAAGCATTCATCCCTTTACTTGGGAGTTAT
TGGCACCGTTTCTGCTGGACTGGGAATTTGCCAGATTTTGACCAAAAGAA
GGCTGACCAAGGCAAGCTTTCTAGACCATT

FMO11653.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG33474-RB 798 CG33474-RB 42..644 9..611 3000 99.8 Plus
CG33474-RA 1284 CG33474-RA 528..1130 9..611 3000 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10422233..10422835 9..611 3000 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 02:58:38 has no hits.

FMO11653.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:06 Download gff for FMO11653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33474-RA 1..606 9..612 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:28 Download gff for FMO11653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33474-RA 528..1140 9..620 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:19 Download gff for FMO11653.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33474-RA 528..1140 9..620 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:19 Download gff for FMO11653.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10422233..10422845 9..620 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:28 Download gff for FMO11653.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6309738..6310350 9..620 99   Plus